Gene Pcal_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2021 
Symbol 
ID4908292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1874993 
End bp1875514 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content63% 
IMG OID640125774 
Producthypothetical protein 
Protein accessionYP_001056902 
Protein GI126460624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000222895 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCTTTA GGAAGACGCT CCTCGAGAGA ATAGCCTCGT ACATCCCCGG CTACGCTGGG 
TACAAAAAGA AGGAGGTCAG GCGGGAAACC GACGCCCTGG TGAGGAGGCA CGTCGCCTCT
ATTCTGGCCC AAGCCGCCCA GTCCCTCGTC CTCTCGCCCG CAGATGCGCG GCTAGTGGCC
GCAAACCCCG AGGCGAGGTA CCTCTGGGAC TCCGTAAAGG CGGCGCTGGA CAGAGTGACC
CAGAGGATAG ACAAGGCCCC CCACGGCTAC TCCGGCTTCT TCGACTTAGT CAAGGTAGAC
GAGGCGGCCC TCGAGGAAGT GTACCGGCAC GACCTCGCCT TGGTGGAATA CGCCAAGAAG
ATCGCCGACG CCGCCGCCGC TGTCAAGTCG CTGAGGCCTG GGAGCGAGGA GTGGGCCAAG
GCGCTGAGAG AGCTGTTGTC CCTCGTAGAG GCCCTCGACG CCGAGGTGGA CAAGAGGGCC
GCAATCCTAA AGGGCATAAG GGAGCCGCCC CAGCTTAAGT AG
 
Protein sequence
MSFRKTLLER IASYIPGYAG YKKKEVRRET DALVRRHVAS ILAQAAQSLV LSPADARLVA 
ANPEARYLWD SVKAALDRVT QRIDKAPHGY SGFFDLVKVD EAALEEVYRH DLALVEYAKK
IADAAAAVKS LRPGSEEWAK ALRELLSLVE ALDAEVDKRA AILKGIREPP QLK