Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_2021 |
Symbol | |
ID | 4908292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1874993 |
End bp | 1875514 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640125774 |
Product | hypothetical protein |
Protein accession | YP_001056902 |
Protein GI | 126460624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000222895 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTTTA GGAAGACGCT CCTCGAGAGA ATAGCCTCGT ACATCCCCGG CTACGCTGGG TACAAAAAGA AGGAGGTCAG GCGGGAAACC GACGCCCTGG TGAGGAGGCA CGTCGCCTCT ATTCTGGCCC AAGCCGCCCA GTCCCTCGTC CTCTCGCCCG CAGATGCGCG GCTAGTGGCC GCAAACCCCG AGGCGAGGTA CCTCTGGGAC TCCGTAAAGG CGGCGCTGGA CAGAGTGACC CAGAGGATAG ACAAGGCCCC CCACGGCTAC TCCGGCTTCT TCGACTTAGT CAAGGTAGAC GAGGCGGCCC TCGAGGAAGT GTACCGGCAC GACCTCGCCT TGGTGGAATA CGCCAAGAAG ATCGCCGACG CCGCCGCCGC TGTCAAGTCG CTGAGGCCTG GGAGCGAGGA GTGGGCCAAG GCGCTGAGAG AGCTGTTGTC CCTCGTAGAG GCCCTCGACG CCGAGGTGGA CAAGAGGGCC GCAATCCTAA AGGGCATAAG GGAGCCGCCC CAGCTTAAGT AG
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Protein sequence | MSFRKTLLER IASYIPGYAG YKKKEVRRET DALVRRHVAS ILAQAAQSLV LSPADARLVA ANPEARYLWD SVKAALDRVT QRIDKAPHGY SGFFDLVKVD EAALEEVYRH DLALVEYAKK IADAAAAVKS LRPGSEEWAK ALRELLSLVE ALDAEVDKRA AILKGIREPP QLK
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