Gene Pcal_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2014 
Symbol 
ID4909772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1869685 
End bp1870245 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content58% 
IMG OID640125767 
ProductPaREP1 domain-containing protein 
Protein accessionYP_001056895 
Protein GI126460617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00133149 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTTCCTA CCAAGACCTG GAAAGACATT GAGTCCTATA GACAGGCCAG GCTCAGGGAG 
GCCCTCGTGG AGGCTAGGCT TTCTCTAGAG TTTTTGGAAG ATGGTCTCGT CCGCAACGCC 
GCCGGCAAGG CCTTTCAGGC GTGGAAGGCC TACCTAGGCG CCTTAGCCGC CGAGCACAGA 
GACAAGCTAA AGCCCATCTA CCCCGGCTCC CGCAAGATAA GGGCAGGGGA AGAGGAGGTG 
GAGGATGTGG ACGTGGTAAT AGCCCTAGCC CCCACCTCTG TCATGTTCAA GATCGCCGCC 
GAGTTGGCCA AATTCGCCGG CGTTGAGGTG GTGAAAAACA CGGCCATAGC CCTCCAACTA 
CACCGCTACC AGTACAACGG GCCAGACCCA GAGGGCCTTT TAACGGACAT ACCAGACGAC 
AAGACGGCGG CCCACCTCAT CTGCGCCCTC CTACAGCCGT TCTCAGAACA CCTAGGCGAA 
CTCTACGACA ACGTCTGTGG AACACTGAAA AGGCAGACCG CGACGACGCC GAGCACCACC 
CCCGGCCAGA AAAGTTTATA A
 
Protein sequence
MFPTKTWKDI ESYRQARLRE ALVEARLSLE FLEDGLVRNA AGKAFQAWKA YLGALAAEHR 
DKLKPIYPGS RKIRAGEEEV EDVDVVIALA PTSVMFKIAA ELAKFAGVEV VKNTAIALQL 
HRYQYNGPDP EGLLTDIPDD KTAAHLICAL LQPFSEHLGE LYDNVCGTLK RQTATTPSTT 
PGQKSL