| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2005 |
|---|
| Symbol | |
|---|
| ID | 4909042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1862361 |
|---|
| End bp | 1862636 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640125757 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001056886 |
|---|
| Protein GI | 126460608 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3830] ACT domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.388818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGACT ACGTGGTAGT GAGCGTCCTC GGCGCAGACA GAGTGGGCAT AGTGGCCGGC
ATAGCCTCCG TGCTGGCCAA GCACAACGCG AACATCGTGG ACATATCTCA AACCGTTGTA
AAGGACATAT TCTCCATGGT CATGATCGTC GACGTGTCTA AGGCGGATGT GGACATCGCC
GCGCTTAGGA GAGAGCTGGA GGAGGAGGGG AGGCGGCTGG GCGTCATGGT GGCGGTACAC
CACATCGACG TGTTTCGCTA CATGCAGAGG ATATGA
|
|---|
| Protein sequence | MGDYVVVSVL GADRVGIVAG IASVLAKHNA NIVDISQTVV KDIFSMVMIV DVSKADVDIA
ALRRELEEEG RRLGVMVAVH HIDVFRYMQR I
|
|---|
| |