| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1993 |
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| Symbol | alaS |
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| ID | 4908986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1849206 |
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| End bp | 1851896 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640125745 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001056874 |
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| Protein GI | 126460596 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA CCCAGATGCT TTCTGCCGAG ATATTCAGGA GGAGGGGCCA CATTAGGAAG
CAGTGCCCCC TCTGCAAGTC GCACTTCTGG ACTCTCCGCC CAGACCAGGA GGTGTGCGGC
GACCAGCCCT GTACCCCGTA CGGCTTCATT GGCAACCCTC CGACGAAGGT TGCTGTCGAG
TCTTTGAGAG ATGTGAGAGA GAGGTTTTTG AGCTTCTTCG AGCGCCACGG CCACGCCCGC
ATTAAGCGGT ACCCAGTGGT GGCCCGGTGG CGGGACGACG TGTACCTAGT GGGGGCGTCT
ATCTACGACT TCCAGCCCTG GGTCACGAGC GGCGCGGTCC CCCCTCCCGC TAACCCCCTC
ACTATCTCCC AGCCCTCTAT TAGGCTGACA GACGTGGATA AGGTGGGTAG GAGCGGAAGG
CATTTGACGG GGTTTGAGAT GATGGCACAC CACGCGTTCA ATTATCCGGA CAAGTACGTT
TATTGGATTG ACGAGACTAC GGAGTACGCC TACAGGTTTT TCACAGAGGA GCTGGGAATT
CCGCCCGAAG AGATCACCTT TAAGGAGTCC ATGTGGGAGG GAGGCGGCAA CGCTGGGGAG
TGCTTCGAGG TGCTGGTGAG GGGGCTTGAG GCGGCCACCC TCGTGTTTAT GCACTACGAG
GTTAAGGACG GCAAGTACGT GGAGCTCCCG CTCAAGATCG TGGACACGGG GTACGGCCTG
GAGCGGATAT ACTGGCTCAT AAAGGGGACG CCCACAATCT ACGACGCAGT GTTCGGCCCC
TATTTGGCCA AGGTTAGGGA GAGGCTGGGG GTGCCAGAGC CGCCGCGGGA CGTGATGGCC
AAGGCCTCTA TATACTTTGG GCAAATGGAC CCCGAGGTCA TCAGCCTCGA CAAGGCGTAC
GACATAATTG CCGAGAAGAT CGGCGTGGAC GGGAAGTGGC TGAGAGAGGT GGTGAAGCCT
CAGGAGGCCC TCTACGTCTT GGCAGACCAC TCTAGGACTG TGGCTTGGAT GATCGCCGAC
GGCGTCATAC CCTCCAACAG CGGCGCGGGG TACTTGGCCA GGCTCTTGAT AAGGAGGGCG
CTTAGGGGGC TTATGTTAGC CGGCGTAGAC GCGCCACTCG TTGAGCTGTT CGACCTACAC
TTGAAGGAGC TGAGGTACGA CTACCCCGAG GTGTGGGAGG CGAGGTCCCT CATTCTCGAG
CTGGTGGATA TGGAGGAGAA GAAGTACAGA GAGGTGTTGA AGTCGGCGCC TGCCGTGGTG
AAGAGGGCGT TGGAGGAGAA CAGGAGGCGG GGGAAGGCGG GGTTAGACAA AGAGGACCTC
GTCACGCTTT ACGACAGCTA CGGGTTGCCC CCAGAGGTGG TGGCCGAGGC GGCGAAGTCC
ATGGGCATAG AGGTCAAGGT GCCAGACGAC TTCTACTCCC TGCTGGCCTC GCGCCACGTG
CGGAGGGAGA AGGGGCGCGA GGCGACGCTG GTAGAGATGG CAAAGGTGGC CGACTTGCCG
CGGACTAGGG AGCTGTTCTA CGAAGACGCG TACATGAGGA CGTTTAAGGC CAAGGTTCTC
CGCGTAATAG ATGGGAAATA CGTGGTCTTA GACCAGACGG CGTTTTATGC GGAGGGCGGC
GGCCAGCCGG CTGACACTGG AGTACTGCGG CACAGCGGCG GCGTGGCCAA GGTGGTGGAC
GTGCAGAGGG TGGGCCACGT AATAGTCCAC GTCGTGGAAG GCGACGTCCC CCAGGAGGGG
TCCGAGGTGG TTGGGGAGGT GGATTGGGAG AGGAGATACG CGTTGATGAA GATGCACACT
GGGACCCACG TCCTCATCCA GAGCATTCGC AGAGTGCTTG GCCCACATAT TTGGCAGGCG
GGGGCGCAGA AGGACATACC CTTCAGCCGC ATCGACGTGA CGCACTACAA GTTGCCCACG
CCTGAGGAGG TGGCAAAGAT AGAGAGGCTC GCCAACGACG TCGTGCAGCG CGACCTCCCA
GTGTACGTCA AAGTCATGCC CCGCAACGAG GCTGAGGCAA AGTACGGCTT CATCCTCTAC
CAAGGCGGCG TGGTGCCCGC CAGAGAGATC AGGGTGGTGC AGATAGGCCC CGACGACGAG
CCCTACGACG TCCAGGCCTG CGGGGGGACC CACCTCAGGC GCACTGGGGA GATAGGCCTC
ATAAAAGTGC ACAAGGTAGA GCGCATCGCA GATGGAGTAG TGCGTTTCAT CTTCACCACG
GGGCCCCACG CAGTTGCCTA TGTGCAAGAG CTAGAGCGCC AGGCCGCAGA GGCCGCCGCC
CTTGGAGGCG GTAGCAAAGA GGAGCTGGTG GAGGTGGTGA AGAGGCTCTT GAAGAGGGCG
GAGGAGGCTG AGAAGAAGGC GAGGCACTAC GCAGAGCTCT ACGCCGCGGC CCTTGCCGAG
AATCTCAAGG CCGAGGCAGT GGGCCAGCGG AGGCTTGCCG TGGTCGAGCT TGACGACGAG
GAGCTCGCCA AGAGGGTTGC CCTCTTGGCC ACCAAGAGGG ACCCCGACCT AGTCCTAGTG
GTTAAGGCTG GCGAGCGGGT GACTATCTAC ACAGGTGGCG TCGACGTGGG GCCAATAGTC
AAGGCGCTTA GAGAGATAGG GTTTAGAGGA GGCGGCTCCA AGACCTTTGC CCAAGGCGTC
TACGCCGGCG ATGTGGAAAA GTTAAAAGAG GCCATTAGGA GGGCCCTATG A
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| Protein sequence | MQKTQMLSAE IFRRRGHIRK QCPLCKSHFW TLRPDQEVCG DQPCTPYGFI GNPPTKVAVE
SLRDVRERFL SFFERHGHAR IKRYPVVARW RDDVYLVGAS IYDFQPWVTS GAVPPPANPL
TISQPSIRLT DVDKVGRSGR HLTGFEMMAH HAFNYPDKYV YWIDETTEYA YRFFTEELGI
PPEEITFKES MWEGGGNAGE CFEVLVRGLE AATLVFMHYE VKDGKYVELP LKIVDTGYGL
ERIYWLIKGT PTIYDAVFGP YLAKVRERLG VPEPPRDVMA KASIYFGQMD PEVISLDKAY
DIIAEKIGVD GKWLREVVKP QEALYVLADH SRTVAWMIAD GVIPSNSGAG YLARLLIRRA
LRGLMLAGVD APLVELFDLH LKELRYDYPE VWEARSLILE LVDMEEKKYR EVLKSAPAVV
KRALEENRRR GKAGLDKEDL VTLYDSYGLP PEVVAEAAKS MGIEVKVPDD FYSLLASRHV
RREKGREATL VEMAKVADLP RTRELFYEDA YMRTFKAKVL RVIDGKYVVL DQTAFYAEGG
GQPADTGVLR HSGGVAKVVD VQRVGHVIVH VVEGDVPQEG SEVVGEVDWE RRYALMKMHT
GTHVLIQSIR RVLGPHIWQA GAQKDIPFSR IDVTHYKLPT PEEVAKIERL ANDVVQRDLP
VYVKVMPRNE AEAKYGFILY QGGVVPAREI RVVQIGPDDE PYDVQACGGT HLRRTGEIGL
IKVHKVERIA DGVVRFIFTT GPHAVAYVQE LERQAAEAAA LGGGSKEELV EVVKRLLKRA
EEAEKKARHY AELYAAALAE NLKAEAVGQR RLAVVELDDE ELAKRVALLA TKRDPDLVLV
VKAGERVTIY TGGVDVGPIV KALREIGFRG GGSKTFAQGV YAGDVEKLKE AIRRAL
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