Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1970 |
Symbol | |
ID | 4908196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1833041 |
End bp | 1833214 |
Gene Length | 174 bp |
Protein Length | 57 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640125722 |
Product | hypothetical protein |
Protein accession | YP_001056851 |
Protein GI | 126460573 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGGCG TACTCATGGC GTCGGTGTTA GAGTTGTTGG GGCCTCACGC CTACGGGCTT TGGAAATACG GCGTAGGCCC CACTGACGAC ATAGAAGCCG CCATCGCCAA GCTGAAGGCC AAGGCGCCGC ACTTGGCCAA GTTCTTAAGC GAGGTAGCCC AACAGAGGCT CTAG
|
Protein sequence | MYGVLMASVL ELLGPHAYGL WKYGVGPTDD IEAAIAKLKA KAPHLAKFLS EVAQQRL
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