| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1957 |
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| Symbol | |
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| ID | 4910068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1823917 |
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| End bp | 1824495 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640125710 |
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| Product | NADH-quinone oxidoreductase, B subunit |
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| Protein accession | YP_001056839 |
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| Protein GI | 126460561 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGG CTCAGGCATT GAGGGAGTTT TTGATGAAGA AGGCTAAGCT AGAGCCGCTC
TTCAAGTGGG GCGTTAGGTG GTCGCTCTGG CCCGTCCACT TGGTCACCTC TTGTTGCGGG
GTCGAGGTTG CCCACACTTC TGCCCCAGGC TTTGACGCAG AGAGGTGGGG AGTCCTCCCG
TTCCACACCA TGAGGCAGAG CAATGTGATA CTGGTGGAGG GTACCGTGAC CAAGAAGATG
GCCAAGGTGT TGAAGCAGGT GTACGAGCAG ATGCCGGAGC CCAAGTTCGT AATCGCCATG
GGGGCCTGCG CCGTGCGGGG AGGACTCTTC TGGAACTCGT ACCACGTGGT GCAGGTGGAC
ACAGTAGTGC CAGTGGATGT ATATATCGCC GGGTGTCCGC CCACCCCCGA GGCAGTGATT
AGGGCGTTCA TCATGCTCCA CAACAAGATC AAGGGTAAGC CGGGGCCCTA CGTGGAGCCA
GTGAAAGTGG ACTTGACGCC TTATCTGCCG CCTCCGCCTA AGCCGCCCGC GGCCAAGCCG
GCGGCCCCAG CCCCACAACA GCAACAACCG GCGCAGTAG
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| Protein sequence | MPMAQALREF LMKKAKLEPL FKWGVRWSLW PVHLVTSCCG VEVAHTSAPG FDAERWGVLP
FHTMRQSNVI LVEGTVTKKM AKVLKQVYEQ MPEPKFVIAM GACAVRGGLF WNSYHVVQVD
TVVPVDVYIA GCPPTPEAVI RAFIMLHNKI KGKPGPYVEP VKVDLTPYLP PPPKPPAAKP
AAPAPQQQQP AQ
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