Gene Pcal_1933 details

Gene Information

• Locus tag: Pcal_1933
• ID: 4908413
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1799864
• End bp: 1800649
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640125684
• Product: hypothetical protein
• Protein accession: YP_001056815
• Protein GI: 126460537

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTGATTT TACTCTACAC GCTTCGGCAG TGGCTCTGGC ACAGATGGGT GGTGGCTTAT 
GCCGTGGCGC TCGCCTCAGT CTCCATATTT GTCATGTACG GCGCCTTTGT GGGACTGGCG 
TGGATTCAAC CTGAGCTCTA CGGCAGAGTG GCCTTGGCGG TGGTCAACGC CTCAATTTTC 
CTTGTCTCCC TAACCTCGCT CCTCTTGGGC CTCTTAGTAT ACCAAGATGA TCAAGAGGGC 
ATGTTAGAGT GGTTTTTGGC CAGGCCTGTG AGCAAGCGCT CTTATCTACT ACAGCGGTGG 
CTAGGCCTCT CCATTTCCAC CGCAATGGCG ACCCTCGCCG CCTACTTAGC CTCTTTCATT 
GTAGTATACG CCGTCTTCGC CGTGTCGCTC CCCCAGCTGT TAATCCTAGG CCTCTCCCTA 
ACCTCGCTCT CTATCTCCCT CCTATCGCTT GGCTTCTCCG TCTCTCTCTA CTTCTCAGAC 
AAAGCCGCCG CCATGGGGGC AGGCTTTCTA ATATGGCTAT ACCTCACCTA CGTCCACGAC 
CTAGTGTTAA TGGTCATAGG CCCCTCTCTC GCCCCTGGAG AGCTCTTTGT GGCATATGTT 
ATAAACCCCA TAGGCGCCGC AAGATTCTTA GCCATGTACA CCATCGACAG CTCCCTCTCC 
TTTCTCAACC CCATCACAGC AGTCGAGGTG AAACTTTCTC TCGGCGACTT GGTCTTAGTT 
TTACCCGCCG CGGCTTTGGC GGCCCCAGCG GCCATATTTA TAGTCCTCGC GGTGAGGCAG 
AGGTAA 

 

Protein sequence

MVILLYTLRQ WLWHRWVVAY AVALASVSIF VMYGAFVGLA WIQPELYGRV ALAVVNASIF 
LVSLTSLLLG LLVYQDDQEG MLEWFLARPV SKRSYLLQRW LGLSISTAMA TLAAYLASFI 
VVYAVFAVSL PQLLILGLSL TSLSISLLSL GFSVSLYFSD KAAAMGAGFL IWLYLTYVHD 
LVLMVIGPSL APGELFVAYV INPIGAARFL AMYTIDSSLS FLNPITAVEV KLSLGDLVLV 
LPAAALAAPA AIFIVLAVRQ R