Gene Pcal_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1913 
Symbol 
ID4908501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1782267 
End bp1782821 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content54% 
IMG OID640125664 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001056795 
Protein GI126460517 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACG AGAATAGACG GAACACTATA AAGATCCTCA TTGGCACCAC GGCAGCAGTG 
GGCGCGGGCA TGTTGGCGAC TCCCCTAGTC GCGTCAATTA TTGATGGAAG GGCTGGATAC 
GTAAAGCCGG AGACCACCGG CGCCGTAAAA GTGGAGATAT GCAAAGATGT GAATTCTTGC 
CCGAAGGAGC TCGGCGTCCC CTTGGACGAG TTGCGCAACG GCCCCGTGTT TAAGCTGATA 
CGCGTAAACA GCATGGCTAT CCCAGCCGTC TTCGGATTAA TCAGAGCAAC AGACGGAAAA 
GAGTACCCAG CGGCCTACGT GGCAATTTGT ACACACTTCG GCTGTCCTCT CAACGTCATG 
GGGGGTAAGT ATCTCACAGG CTTTAATTGT CCATGTCACG GAAGCGTGTT CACCGTGTGC 
AACAAGCCGG AGGGGTGCGG CAACGCCAGA TTTCTCGAAA TGTACGTATC TGGCGGCCCA 
GCTGTTAGAT CGCTTAGGTC TATCGTGGTG GCGGTGAAAG ATGGAGTAGT GTATCCCCTC 
GTGGCGCACA TATGA
 
Protein sequence
MVDENRRNTI KILIGTTAAV GAGMLATPLV ASIIDGRAGY VKPETTGAVK VEICKDVNSC 
PKELGVPLDE LRNGPVFKLI RVNSMAIPAV FGLIRATDGK EYPAAYVAIC THFGCPLNVM 
GGKYLTGFNC PCHGSVFTVC NKPEGCGNAR FLEMYVSGGP AVRSLRSIVV AVKDGVVYPL 
VAHI