Gene Pcal_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1897 
Symbol 
ID4908239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1763686 
End bp1764612 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content59% 
IMG OID640125648 
Productmethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_001056779 
Protein GI126460501 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA AGCCGCTTCA CGAGAAGACG AAGGAGTGGG CGCGGCGGCA TGTACGGCTT 
TTGGAGGAGG TCGGCGTTAC GCCTAAGCTC GCCGTGTTGC TCCTCAACGA CGACCCAGTG
GAGCTGGAGA CTCAGCGGAG GTACGTATCG CTGAAGGCTA GAGACGTGAG AGAGGTGGGG
GGCGAGGTGG AGATATACGA GCTCGTGGAC GTGCCGCCGG AGAGGCGGAG TAAGGAGGCG
CTCTACCTAA TAGAGAGGCT GAATAGGAGA GACGACGTAA CTGGCATACT TATACAAAAG
CCCGTTCCGC CCTTTGTGGA TGAAGATCTC CTCTTCCAGA GGCTAAGCCC TGAGAAAGAC
GTAGACGCGC TGACCCCCGA GAACAAGAAG AGGTTGTTGG CTCTCTTTGA CCTAGATCGG
GACCTCTTGC CTTGTACCCC CGCTGGCATA TTAGAGTTGC TTCAGATGTA CGGCGTAGAG
GTAAAGGGGA GGGACGTGAC GGTGGTGGGG AAGGGTGAGC TAGTGGGCAA GCCTCTCGCA
GTCATGCTCA TGCAGTTGGA CGCCTCAGTC TCCGTGCTCC ACGCCTTGAC GAGAGACAAG
CTCCGCTACG TCAAAGAGGC AGACATCGTC ATATCCGCAG TGGGAAGGCC ACCTGAGCTG
TACCGCGACA ACCCCTGGCG CCTCACGGGG GACATGGTCA AGGAGGGCGC CGTGGTGGTG
GGTGTTGGGG GGAAGGTGGA CCCCGCCACA GGCAAGTGGT ACTTCGACGT AGACGAGAAG
TCTGTGGCAG AGAAGGCCTC CTACCTAACC CCCAACCTAG GGGGCGTGGG CCTCGCCACC
AGGGCCCGTC TGTTGAAAAA CTTAATCCGC GCCTCATACA ACGTGGCTAG GGCAACTGCC
GCGCCTAGAC TGTTAAAAGC TTTTTAA
 
Protein sequence
MSGKPLHEKT KEWARRHVRL LEEVGVTPKL AVLLLNDDPV ELETQRRYVS LKARDVREVG 
GEVEIYELVD VPPERRSKEA LYLIERLNRR DDVTGILIQK PVPPFVDEDL LFQRLSPEKD
VDALTPENKK RLLALFDLDR DLLPCTPAGI LELLQMYGVE VKGRDVTVVG KGELVGKPLA
VMLMQLDASV SVLHALTRDK LRYVKEADIV ISAVGRPPEL YRDNPWRLTG DMVKEGAVVV
GVGGKVDPAT GKWYFDVDEK SVAEKASYLT PNLGGVGLAT RARLLKNLIR ASYNVARATA
APRLLKAF