Gene Pcal_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1886 
Symbol 
ID4908321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1754055 
End bp1754309 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content62% 
IMG OID640125637 
Producthypothetical protein 
Protein accessionYP_001056768 
Protein GI126460490 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1828] Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.947495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGATACG TCGTCTACCT AAACGTGACG TATAAGCCCA CGATAAGGGA GCCCGAGGGG 
GAGACAATTT CAAGGGAGCT CCTCGCCAGG CTTGGATACA GCGTAGAGGT TAGGGCTGGG
AAGTGCCTGG CCCTCTACTT GGAGGCCTCT TCTCCCGAGG AGGCGGCGGC TAAGGCGCTT
GAGGTGGCCA AGGCGGCTAG GCTGGGGAAC CCCAACGTCC ACGTGGTCGA GGTGCTCAAG
GTGGCGCCGG CATGA
 
Protein sequence
MRYVVYLNVT YKPTIREPEG ETISRELLAR LGYSVEVRAG KCLALYLEAS SPEEAAAKAL 
EVAKAARLGN PNVHVVEVLK VAPA