Gene Pcal_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1836 
Symbol 
ID4909717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1698520 
End bp1698768 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content53% 
IMG OID640125586 
Producthypothetical protein 
Protein accessionYP_001056719 
Protein GI126460441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.855128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGC TATTCGGCTT TCTGGGCCTT GTATTAATAG CGGCGGCGTG GGCCGTGAAC 
ATCTTGAGGA GAAGCCCCCC GCCGCCTCTA GATTTGACAA TACTCTACTT CCTCGGAAGC
GTCTCGCTCA CGATCTACGC CGCACTGATT GGCGATGCGG TATTTACGGC ATTGAACGCC
CTGTCAAGCG CACTTTCTTT CATAAACCTA GTAAGAGCGC TACGCTTAAA AACGGGGACT
GCCGGGTAG
 
Protein sequence
MIQLFGFLGL VLIAAAWAVN ILRRSPPPPL DLTILYFLGS VSLTIYAALI GDAVFTALNA 
LSSALSFINL VRALRLKTGT AG