| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1813 |
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| Symbol | rps11p |
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| ID | 4908135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1683013 |
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| End bp | 1683438 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640125562 |
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| Product | 30S ribosomal protein S11P |
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| Protein accession | YP_001056696 |
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| Protein GI | 126460418 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03628] archaeal ribosomal protein S11P |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACGG CAGAGACACC GCAACAGCCA CAGCAACAAC AAAAGCTCAG GTGGGGCATA
GCGTGGATAT ACTCGTCGTC AAACAACACC ATTATCACAA TTACAGACCT CACAGGCGCC
GAGACGGTGG CGCGGGTAAG CGGAGGCATG GTGGTACGCG CAGACAAAGA CAAGCCGTCG
CCCTGGGCCG CCATGCAGGC GGCGTACAAG GCGGCGCAAC TAGCCCTCGC CAGGGGGATC
AACGCAGTGC ACATAAAGGT AAGAGGCCCC GGGGGCTACG GCATGAAGGT GCCCGGCCCC
GGCGCCTCCG CCGCAATACG CGCCTTGGCT CGCTCCGGCT TAGTGATAGG CAGAATAGAG
GACGTCACCC CCATACCGCA CGACACTATT AGGCCCCCCA GCGGCCGCAA AGGCAGAAGA
GTGTAA
|
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| Protein sequence | MSTAETPQQP QQQQKLRWGI AWIYSSSNNT IITITDLTGA ETVARVSGGM VVRADKDKPS
PWAAMQAAYK AAQLALARGI NAVHIKVRGP GGYGMKVPGP GASAAIRALA RSGLVIGRIE
DVTPIPHDTI RPPSGRKGRR V
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