| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1808 |
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| Symbol | |
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| ID | 4908122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1676658 |
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| End bp | 1678625 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125557 |
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| Product | signal-transduction protein |
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| Protein accession | YP_001056691 |
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| Protein GI | 126460413 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAACTA GGGAGGAGTT GGAAAAACTT GCCGAGAAGA GGGTCCCTCA GTTTGTTAGA
GATGTTGTGG AACACCCGCC GTTTAGAGTT ACTGTGAACA CCACGCTTGA GACGCTTGCA
GCGTATCTAA GGAAATTCCC CGTGGACGTG GTCCCGGTGT TCAAGTCCGT GTTCTCCGAC
GAGGTCGCAG GGGTTGTGTA TCCACACACG GCGCTTCTTC TTAAGAGCAA GAAGCTCGAC
GCCAAGGTGG GGGAGTTTTT GAATCAGCCG CTTGTGGTTA AGGAGAGCTG GAGAATTGAG
AACGTGGCCG AGATGTTGAT AAGCGAGAGC AAGTGGGGCG CCGTCGTAGT AGACGAAGAG
GGGAAGTTCG TGGGCGTGGT GTCGCTGAGA GGCCTACTCT CAGCCTTACT TCTGAGGGAG
CCGAAGGCCA AGTCCGTCGC CGCGGTATAC ACGTCGATCG ACGAGAAAAA GCCGAGAGTA
GGCTTTGTTA AAGCGATAGA GAAGGTGTCT AAGATCTTCC ACAAGCTTGT GGGCGGGGAA
GTGGACGGCT ATGTGGTGTT GAACAGGGAG GGGGGAGCCG CTGGAATATT GACGGTGTGG
AATTTCTTGA AGAGTCGGAG GTGGTTTAGG GGATCTGGGG AGCCGCGCGC CATCTTTGGC
ACGCGGGTTA CGAGGGGCGA GAGCAAGCCC AGGGGGGTGG CCAGAGTCTG GAGAATTATG
TCCAGGGGGG TCGCCGTGGC GAACCCCGAT ACTCCCATCA CCGACGTGGC CAGGTACATG
GCCACCTTCG GAATATACGT AGTGCCCGTC GTAGATAGAA ATGGCAAAGT CATAGGCGCG
GTCACCGCGT GGGACGTCCT CCACGCGTAC CTATACGGCC CCAAGGAGGG GCGCGAAGAC
GTAGAGGTGA AGACAGCTGT GGAAGTCCCC GTGAGTAAGC CAAGCATGGA GGCCGTCATT
AGGTTAAAGC CTGTGAAACA CGTGACTGGG CTTAGGGCGC GCGACGTCAT GTTGAGCGAC
GTGCCGATGG TAAACGTGAG AGACCCCCTG TCGAGTATTA GGAAGGCGTT CCTAAGGTCG
AAGAGCGGGA TCCTCGCGGT AGTGGACGAC AGCGGGAAAG TGGTTGGGTT TATAACTAGG
AGAGACTTTA TGTCGTACAT CGCAGAGAAG TCCTTGGGGT ACTGGAGGAG GCAGAAGGGA
AAACTCCTAG TTCTCAGGGA AGAGGCTCTG CCAGGCGAGC AGGCCAAGTT GGCGGTTGAG
GAGGGCACAG CTGGCGACTT GGCCAAGTCT GAGTACCCCA CGGTTTCTGA GAGCGCGACG
CTGGAGGAGG TGGCGTATAA GATGTTGGCC GCTGGGACAG ACTACGTAGT TGTTATAGAT
AGCGCTGGGC AGCCCATCGG CGTTGTTACA AAAGACGAGC TAGTAAAGGC TTATAAGGAG
CGTGGGAGAA GCGTCAAGGT AGGGGAGCTC ATGACACCCG CCGACGTGGC GGCGGTAAAC
CCATTCTCAA GCCTCATGTC AACAACTAGG AAGATAAACG CCTTTGAGCT CGACGGAGTT
GTAGTCGTCG AAGGCGGCAA CATAATGGGG GTAGTCACGG TGGACGACTT GGCCTTGAGG
CCCGTGGAGG AGACTTTGAG AGGAGAGAGG GTAGTGTATT TCACAAAGTC GGGAGTTCTG
CGAAAAGCAA CAACCGGCCT GTCTAGGCTT AGGTACTCTA AGGTGGGCAC CTTAACCGCG
CTCGACGTGT CTAGGCCAGT GGATCACGTC GCCAATGTCA ATGCAGATGT GAAAGAGGTC
CTCGACAAAC TCGTGGAGCA GGGCGTTGTC CCAGTGGTAG ACGAGCAAGG CCGGCTAGTC
GGCGTGTTGA ATAAGATGGA CATAGTGAAA GACTTGGCCA GGGTGTATGT GACATACGCG
ATGCCCGAGA AGCTGGCCGA AGTCAAGCAA GTAGAGGAGC GGGCCTAG
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| Protein sequence | MLTREELEKL AEKRVPQFVR DVVEHPPFRV TVNTTLETLA AYLRKFPVDV VPVFKSVFSD
EVAGVVYPHT ALLLKSKKLD AKVGEFLNQP LVVKESWRIE NVAEMLISES KWGAVVVDEE
GKFVGVVSLR GLLSALLLRE PKAKSVAAVY TSIDEKKPRV GFVKAIEKVS KIFHKLVGGE
VDGYVVLNRE GGAAGILTVW NFLKSRRWFR GSGEPRAIFG TRVTRGESKP RGVARVWRIM
SRGVAVANPD TPITDVARYM ATFGIYVVPV VDRNGKVIGA VTAWDVLHAY LYGPKEGRED
VEVKTAVEVP VSKPSMEAVI RLKPVKHVTG LRARDVMLSD VPMVNVRDPL SSIRKAFLRS
KSGILAVVDD SGKVVGFITR RDFMSYIAEK SLGYWRRQKG KLLVLREEAL PGEQAKLAVE
EGTAGDLAKS EYPTVSESAT LEEVAYKMLA AGTDYVVVID SAGQPIGVVT KDELVKAYKE
RGRSVKVGEL MTPADVAAVN PFSSLMSTTR KINAFELDGV VVVEGGNIMG VVTVDDLALR
PVEETLRGER VVYFTKSGVL RKATTGLSRL RYSKVGTLTA LDVSRPVDHV ANVNADVKEV
LDKLVEQGVV PVVDEQGRLV GVLNKMDIVK DLARVYVTYA MPEKLAEVKQ VEERA
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