Gene Pcal_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1743 
Symbol 
ID4908666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1621845 
End bp1622612 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content52% 
IMG OID640125490 
Productkinase 
Protein accessionYP_001056626 
Protein GI126460348 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.11698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGAA ATCCAACGCT GGACATAATA TACACTGCCA CGGGTGTCTA CAAACGCTAC 
GGCGGCCCCA TATACTACGC GGCGCTTGCG CTCAGAGCCC TAGGAGCAGA GGTGGAGGTG
ATGGGCGTCG CCTCGCCTGA CGACGTTGAA AAGCTAGGGA GAATATTCGC AGAGATGGGG
GTAAGGCCGC GCCTATTTGA ATCCGACTTT ACGACGACCT TTGAGTTAGA CTACAGAACG
AGGCCTAGGT CTGTGAAACT GTTGAAAAAG CCCTCTAGGG GCATCGGAAG AGTGGCGGGC
GACATTGTAA TTCTATCCCC AGTCTACGAT GAGCTGAAAA GCGCCGAAGT CGATGCGCGC
ATAGTTGTGG CCGATTTACA AGGGTATCTA CGCTCGCAGA GCCCCCTCCC ACGCGCAGAT
CTGGTGCATT TCTCAATAGA CGATATCCAG TTGACCCTCA GGGAACTTGT GCACTTTGCA
GAGAGGTGGC CGCGTGTTGT GTACACGCTT GGCGAAGAGG GTGCCTACGT CCTCTTTGAC
GGCTCTATCT ATCATATAAA TAGCGCAGAA GTGTCAACAG ACGACACGAC GGGTAGCGGC
GACGTGTTTC TAGCGGTGTT GACATATTTC CACTTAGTCA AGGGGCTGGA CATCTTGTCT
GCGACATGTG AAGCTAGCAT GTATGTGGCT GGGTTCTTAT TAACTAGACA AATCGTAAGA
CACGAGTTTA ATTGTGTTAA ACGAGTTGTT CCAATGACGC AATTCTGA
 
Protein sequence
MAGNPTLDII YTATGVYKRY GGPIYYAALA LRALGAEVEV MGVASPDDVE KLGRIFAEMG 
VRPRLFESDF TTTFELDYRT RPRSVKLLKK PSRGIGRVAG DIVILSPVYD ELKSAEVDAR
IVVADLQGYL RSQSPLPRAD LVHFSIDDIQ LTLRELVHFA ERWPRVVYTL GEEGAYVLFD
GSIYHINSAE VSTDDTTGSG DVFLAVLTYF HLVKGLDILS ATCEASMYVA GFLLTRQIVR
HEFNCVKRVV PMTQF