Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1743 |
Symbol | |
ID | 4908666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1621845 |
End bp | 1622612 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640125490 |
Product | kinase |
Protein accession | YP_001056626 |
Protein GI | 126460348 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.11698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGGAA ATCCAACGCT GGACATAATA TACACTGCCA CGGGTGTCTA CAAACGCTAC GGCGGCCCCA TATACTACGC GGCGCTTGCG CTCAGAGCCC TAGGAGCAGA GGTGGAGGTG ATGGGCGTCG CCTCGCCTGA CGACGTTGAA AAGCTAGGGA GAATATTCGC AGAGATGGGG GTAAGGCCGC GCCTATTTGA ATCCGACTTT ACGACGACCT TTGAGTTAGA CTACAGAACG AGGCCTAGGT CTGTGAAACT GTTGAAAAAG CCCTCTAGGG GCATCGGAAG AGTGGCGGGC GACATTGTAA TTCTATCCCC AGTCTACGAT GAGCTGAAAA GCGCCGAAGT CGATGCGCGC ATAGTTGTGG CCGATTTACA AGGGTATCTA CGCTCGCAGA GCCCCCTCCC ACGCGCAGAT CTGGTGCATT TCTCAATAGA CGATATCCAG TTGACCCTCA GGGAACTTGT GCACTTTGCA GAGAGGTGGC CGCGTGTTGT GTACACGCTT GGCGAAGAGG GTGCCTACGT CCTCTTTGAC GGCTCTATCT ATCATATAAA TAGCGCAGAA GTGTCAACAG ACGACACGAC GGGTAGCGGC GACGTGTTTC TAGCGGTGTT GACATATTTC CACTTAGTCA AGGGGCTGGA CATCTTGTCT GCGACATGTG AAGCTAGCAT GTATGTGGCT GGGTTCTTAT TAACTAGACA AATCGTAAGA CACGAGTTTA ATTGTGTTAA ACGAGTTGTT CCAATGACGC AATTCTGA
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Protein sequence | MAGNPTLDII YTATGVYKRY GGPIYYAALA LRALGAEVEV MGVASPDDVE KLGRIFAEMG VRPRLFESDF TTTFELDYRT RPRSVKLLKK PSRGIGRVAG DIVILSPVYD ELKSAEVDAR IVVADLQGYL RSQSPLPRAD LVHFSIDDIQ LTLRELVHFA ERWPRVVYTL GEEGAYVLFD GSIYHINSAE VSTDDTTGSG DVFLAVLTYF HLVKGLDILS ATCEASMYVA GFLLTRQIVR HEFNCVKRVV PMTQF
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