| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1742 |
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| Symbol | |
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| ID | 4909853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1621016 |
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| End bp | 1621876 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640125489 |
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| Product | signal transduction protein |
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| Protein accession | YP_001056625 |
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| Protein GI | 126460347 |
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| COG category | [K] Transcription |
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| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.12379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGTT TATCAGATTC TGTGTACAAC GTATTGAAGG CCCTTGCAGA ACTGTACAAT
AAAACTGGGA CGCCTGTCAA ATCTAGAGAC ATTGCCAATG TGCTCGGCAT ACATGAGGGC
TATGTGCGCA ACATGTTGTC TATATTGAAG TCGATGGGCC TCGTTATTAG TAAGGCGGGA
CCCCACGGTG GCTATATACC TACGCCTAAG GCGGCTGACG TGTTGTCCCG CCAGACTTTT
TCGATACCTA TAGTCGCAGG GGCCAACGTC ATAGGCTATG CCTTAGACGT AACCCTAATC
GGCCTACTCT CCGAGAGGCC CTACGCCTCG GTCCGCGTTG TTGGAGACTT GTCGGAGTTT
GTAAATAGGG AGGTTAAAAT AGGCCCTCTG CCCAGCGGCG TCGTAGTAAT AGGGAAACTG
GCAAGGGCCG ACTTGGAATC TCTCATTGAG ATAACTTCAA TAGTCTCGAT ACCTAGAACT
AGCGCAAAGA ACATAATGAC GCCAAACCCG ATAGTCGCCA AGCCCAGCGA CCCCCTAGGC
AACTACATTA GACTTTTTAT TGAGAAGCGG TACAGAGGCA TACCTGTCAT AGACGAGTCC
AAGAGACCCA TAGGCCTATT GACTGCGTCA AAGGTCATGG AGGCAGTGGC CTCCTGCCGC
CTTGACGCCA AGGTCGGCGA CTATATGATG CCTAATCCAC CGACGGTACA TGAGGAGGAG
GATATCCACG AGGTTATTAG GCTCATGGTC ACCAGCGGCA TTGGAAGAGT CCTCGTAGTA
GACTCCGAGG ATAGGCTGGT GGGCATTATT ACGCGGACTG ACGTGCTTCT CAGAATTGCG
TCATTGGAAC AACTCGTTTA A
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| Protein sequence | MAGLSDSVYN VLKALAELYN KTGTPVKSRD IANVLGIHEG YVRNMLSILK SMGLVISKAG
PHGGYIPTPK AADVLSRQTF SIPIVAGANV IGYALDVTLI GLLSERPYAS VRVVGDLSEF
VNREVKIGPL PSGVVVIGKL ARADLESLIE ITSIVSIPRT SAKNIMTPNP IVAKPSDPLG
NYIRLFIEKR YRGIPVIDES KRPIGLLTAS KVMEAVASCR LDAKVGDYMM PNPPTVHEEE
DIHEVIRLMV TSGIGRVLVV DSEDRLVGII TRTDVLLRIA SLEQLV
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