| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1734 |
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| Symbol | |
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| ID | 4908234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1614565 |
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| End bp | 1615461 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640125481 |
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| Product | zinc finger TFIIB-type domain-containing protein |
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| Protein accession | YP_001056617 |
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| Protein GI | 126460339 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.610707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGA GACTTATCTT CGAGGTGGAG GAGTATCGCT GCCCTGTGTG CGGCAGCGAC
AAAAACATAG TTATCGACTA CGAGGGGGGG CAGATAATTT GTAAAAACTG TGGAACTGTA
CTAAAGGAGG GAGTCGCCGA CTTGGGCCCA GAATGGAGGA AGCCTGAGGC GTCTAGGGCT
TATGCAGGGC CCATAGGATC CTCCATTGGC GATATTGAGC GTGGAAATGT GAAAATCACG
GATAAGCTCA GGGCCATAAT GCTTGGCAAA TTCTCAAAGC CTATGTCGAC GCCGTTGGAG
CGCCTTGAAT TAGATGCTAG AGAGTTTTTT GAAAGTGCCA GAGTTAGAAT TGGCCTCCCT
AAGGTGGTTG TAGACGAAGC TGTGGCTCTG TATAGGGAGG TGTATAAGGC GGGCTTTAGG
GCTCCTAGGA TCGAGGGGTA CGCCGCCGTG TTGTACTTTG TTGCAAAGAG GCATGGGCTA
GCTTCGGTGA CTCTAAAGGC TTTGACGGAG AAGTTGGGCA TTGATAGGTC GGCCCTTATC
TCTGCTTATA TGGAACTTAT GAAGGTGGCG CTAAGCCTCG GCATTAGGCC GCCGAAGGCA
GATCCAAAGA TCTACATACC GAGAATAGTC GCGTCGCTCG GCATAGGAGA TGAGAAGTCT
GCAGAGGTGC AACGCGTGGC TGTAGACATT TTGCGGTACA TAATATCCTC GCCGCGTATT
AGAAATGGTA GAAAGCCCCA AGTCTTGGCC GCGGCGGCCG TCTACTATGC ATGTTTCATC
GCCGGCGTTG AAGTGACTCA GAAAGAGCTT GCGAGAGCTG CAGACTCCAC GGAGGGGCCT
ATTAGGGAGC TCTTGAGAGA GCTAGCCGAC AAGCTCTACA TAGAGCTCAC CGTGTAG
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| Protein sequence | MTRRLIFEVE EYRCPVCGSD KNIVIDYEGG QIICKNCGTV LKEGVADLGP EWRKPEASRA
YAGPIGSSIG DIERGNVKIT DKLRAIMLGK FSKPMSTPLE RLELDAREFF ESARVRIGLP
KVVVDEAVAL YREVYKAGFR APRIEGYAAV LYFVAKRHGL ASVTLKALTE KLGIDRSALI
SAYMELMKVA LSLGIRPPKA DPKIYIPRIV ASLGIGDEKS AEVQRVAVDI LRYIISSPRI
RNGRKPQVLA AAAVYYACFI AGVEVTQKEL ARAADSTEGP IRELLRELAD KLYIELTV
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