Gene Pcal_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1728 
Symbol 
ID4909198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1611990 
End bp1612415 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID640125475 
Productmethyltransferase type 11 
Protein accessionYP_001056611 
Protein GI126460333 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.726631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGGCG ACAAGAAGGG GGTGCTCGAG CTCTACGAGA AGTTGGCCGA GGTGTACGAG 
GAGGTTTACT GCGGAGAGCA GAGGCGGAAG TACTGGCTCA TATCGGGGCA AGCAGGTGAG
AGAGTCGTGG ACGCCGGGTG CGGCGTCGGC ATTGCGCTGG AGGTGTTGGC GGACAAGTAC
GTGGTCTGCC TAGACCTCTC CGAGGATATG CTGAGGAGGG CGAGGGATAG GAGGGGAGAG
CTGGGCGAGT TGGTGCTTGG GGACTATTGG CTTCCCCCCT TCAGAGATGG GGCGTTTGAC
GCGGCGTTGT TCATCTCCTC GCTTGAGCCA CAGCGGTTTT CGGAGGCCCA CCAGCTGTGG
CGACGCATTG CGAAGAGGAC GTTTTTTGAG TTTAGGGGGG AGTGGTACAT ATTCAACGCA
ACGTAA
 
Protein sequence
MYGDKKGVLE LYEKLAEVYE EVYCGEQRRK YWLISGQAGE RVVDAGCGVG IALEVLADKY 
VVCLDLSEDM LRRARDRRGE LGELVLGDYW LPPFRDGAFD AALFISSLEP QRFSEAHQLW
RRIAKRTFFE FRGEWYIFNA T