| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1726 |
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| Symbol | |
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| ID | 4909760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1609761 |
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| End bp | 1611056 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125473 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_001056609 |
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| Protein GI | 126460331 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.878395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTGA GCGAGGTATT TAGCAAGCTA ATTGAGAAGA TACGCGGGGT AGACTACATA
GACGAGGCGG TTTTACAGGA GTTGTCGAGG GAAATCCAGA GGAGCTTGTT GAAGGCTGAT
GTTCCGCTGG AGTTGGTAAA GGCCTTTACC GACAGTGCGG TAAAGAGGAT AAGGGAGGAG
AAGCCCCCTG CGGGAATACC GCCGAGGGAG TATTTGGTCT ATGTGCTCTA CGAGGAGTTG
GTAAAGTTGT TGGGGGGCGA GCAGCCGGCT GAGTTTAAGC CTACGAAGAA GCCGTATGTG
GTACTGCTCC TGGGGGTAGA GGGGAGCGGT AAGACGACTA CTGCGGCGAA GTTGGCCAAG
TACTTGGCAA AGAGGGGGTA TAAGGTGGGT TTAGTGGAGA CTGACACGAT TAGGCCCGCC
GCCTTTGACC AGTTAAAGCA GTTGGCGGAG AAAATCGGCG TGCCTTTCTA CGGCGAGAGA
GATGGGAAAA ACGCGGTGGA GATAGCCGTG CGCGGTGTCC AGAACTTTAA GAACATGGAC
GTCGTGATCA TAGATACCGC AGGCCGCCAC AGAAACGAGG AGGAGCTCTT GAAAGAGGTC
AAGGCCATAT ATGACGCGGT GAAGCCCGAC GAGGTGTTCC TAGTGATAGA CGCAACTGTG
GGCAAGCTCG CCGCGGCGCA GGCTGAGGCC TTCATGAAGT ACCTGCCCAT ACACTCGGTG
ATAATTACTA AGATGGACAG CACAGCCAGA GGCGGAGGCG CACTGGCGGC GGTGGCCAAG
ACCGGGGCCA GGGTGAAGTT CATAGGCGTC GGCGAAGACG TGGACGAGTT TGAGCTGTTT
AACCCTAGGA AGTTTGTGGC AAGAGTACTC GGCATGGGCG ACTTAGACGC CTTGGTGGAG
AAGATAAAGG CCGTCTTTGA GGAAGACAAA GTCCTCGAAG AGCTGGAGTC CGGCCGCCTA
GATCTCCTCA CTTTTAAGAA GCAGATAGAC AGCTTGCTCA AGCTGGGCCC ACTGAGCAAG
GTCTTCCAAC TCCTGCCGTC AAACTTCGCC ATTAAGGTGT CAGAGGAGCA GATAGAGCTG
TCGCAGAAGA ACTTGCGCAA GTGGAAGGCC ATCTTGAGCT CAATGACCAT GGAGGAGCTG
AAGCACCCAG AGGTGTTAAA CGCAAGCCGC ATACGTAGGA TAGCCATGGG GGCAGGCGTC
ACGCCGAAGG ACGTAAAGGA GATGCTAACC GTGTTTGAAA ATATGAAGAA GATGAGCAAG
ATGTTGAAGC GCCAGATGCG CATGAAAATG AGGTGA
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| Protein sequence | MKLSEVFSKL IEKIRGVDYI DEAVLQELSR EIQRSLLKAD VPLELVKAFT DSAVKRIREE
KPPAGIPPRE YLVYVLYEEL VKLLGGEQPA EFKPTKKPYV VLLLGVEGSG KTTTAAKLAK
YLAKRGYKVG LVETDTIRPA AFDQLKQLAE KIGVPFYGER DGKNAVEIAV RGVQNFKNMD
VVIIDTAGRH RNEEELLKEV KAIYDAVKPD EVFLVIDATV GKLAAAQAEA FMKYLPIHSV
IITKMDSTAR GGGALAAVAK TGARVKFIGV GEDVDEFELF NPRKFVARVL GMGDLDALVE
KIKAVFEEDK VLEELESGRL DLLTFKKQID SLLKLGPLSK VFQLLPSNFA IKVSEEQIEL
SQKNLRKWKA ILSSMTMEEL KHPEVLNASR IRRIAMGAGV TPKDVKEMLT VFENMKKMSK
MLKRQMRMKM R
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