| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1710 |
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| Symbol | |
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| ID | 4909226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1592666 |
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| End bp | 1593304 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640125457 |
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| Product | siroheme synthase |
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| Protein accession | YP_001056593 |
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| Protein GI | 126460315 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0722893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATTC CTCTTTGGGT AGAGGCCTCT CGCCTTAAGG TGTTAGTCCT CGGCGGCGGC
GCCGTGGGGA CAAGGAGGGC AAAGTTCTTC GCCTCCAGCG GCGCCAAGGT GCGCGTAATT
GCTAGAGAGG TCAGCGACGA ACTGAAGAAG TTGCCCGTGG AGATAAAAAT TGCGGACTTA
AACGAGTACG ACCCAGCAGA AGATGTTGAG TGGGCTGACA TCGTCGTAGT GGCAGTTAGC
GACAGAGAGT TAGCCGACCG TTTGTTCCGC CTGGCCAGCG AAAGGGGGAA GCTTGTAAAC
GACGCCACAG ACGCCTCCCG CACCCATGTG GTTGTCCCCT ATGAGAGAGT TGTCGAGGGC
CTTAGAGTGG CTGTCACAAG CGAAGGCGCC GCGGGAGCCC CCGCGCGCCT CTCTCTGGAC
GTGATTGAGG AATGCATCAA GAGGAGCTGG ATACCGACAT TCTTCAAGGC CTACAAGGCG
TTGAAGGCTG AGGCAAAGGA GCGTATACCC GACGTGAGGC GCAGATTGGA CTTCTACGAC
GCGTTGTGGC GCGACGAGGC GTTTAGAACA AGCGTCTTCA ACGGCGACGT AGACGGCGCA
GTAGAAAGAG GGCGCGAGAT TATGAGGCAG TATATATAA
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| Protein sequence | MRIPLWVEAS RLKVLVLGGG AVGTRRAKFF ASSGAKVRVI AREVSDELKK LPVEIKIADL
NEYDPAEDVE WADIVVVAVS DRELADRLFR LASERGKLVN DATDASRTHV VVPYERVVEG
LRVAVTSEGA AGAPARLSLD VIEECIKRSW IPTFFKAYKA LKAEAKERIP DVRRRLDFYD
ALWRDEAFRT SVFNGDVDGA VERGREIMRQ YI
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