Gene Pcal_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1654 
Symbol 
ID4908704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1544197 
End bp1545114 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content60% 
IMG OID640125401 
Productaldo/keto reductase 
Protein accessionYP_001056537 
Protein GI126460259 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.306756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTATA GGGCCTACGG GGATCTCCGC ATATCTGAGA TTGGGTTCGG CGCGTGGGTG 
TTCGACGAGA TGTACGGCGT GGCGGATTTC GACGAGGCGC GAAGACTCGT GGAAAAGGCC
ATAGACCTGG GGATAAACTT CTTCGACACA GCGGACGTAT ACGGCAGGGG GAGGAGCGAG
GAGTACCTCG GCCGCCTCTT GGCGGGCAGA GAGGGAGTGT ACATAGCCAC CAAGGTGGGG
TACGACTTTT ACTCAAGCCA AAAGCCAGTT AGGAGATACG ACGAGGAGTA TCTGGAATAT
GCCGCAGAGA TGTCCGTGAG GAGGCTGGGA AGGAGGCCCG ACGTTCTCCA GATCCACAAC
GCCCCCAGCG ACGTGTTGAA GAGGGGGGCT GGGCTGAGGC TAAAGGGGCG CTTCGCCAAA
TACGTCGGCG CCGCCCTCGG CCCAGAGACC GATGTCCTAG AGGAGGGGCT GGCGGCCCTG
GCGGCGGGCT ACGACGCGTT GATGTTCGTC TTCAACATAC TGGAGCAGGA GCCAGCGCTA
ACACTGATTA GACGTGGGCA AGGCAGGCTT CTCCTGGCGA GAGTGCCTCA TGCCACCGAT
GTGCTCACCG ACAGGTTTAA GCCGGAGTTT CCGCCGGGCG ACCACAGGTC GTTGAGGAGC
CGGGAGTGGT TGCTGAAGGC TAGGAGGCTT GTTGAAAGCG AGATAGTGCC GCTTGCAAGA
GAGCTCGGCT TAACCCTGGG GCAGTACGCG TTGAAGTTTG TCCTCTCCTA CCCCATAACT
TCGGTGGTGG TCACAGCGAC GACTGTGGAG GAGCTTGAGG AATATGCCGA GGCCAGCGAC
GGGAAGCCGT TGCCGAGACA CCACCTGGAA GCGCTTGAGG AGTTCTGGAA GAGGCATAGG
GGGGAGTTGG CGAGTTGA
 
Protein sequence
MRYRAYGDLR ISEIGFGAWV FDEMYGVADF DEARRLVEKA IDLGINFFDT ADVYGRGRSE 
EYLGRLLAGR EGVYIATKVG YDFYSSQKPV RRYDEEYLEY AAEMSVRRLG RRPDVLQIHN
APSDVLKRGA GLRLKGRFAK YVGAALGPET DVLEEGLAAL AAGYDALMFV FNILEQEPAL
TLIRRGQGRL LLARVPHATD VLTDRFKPEF PPGDHRSLRS REWLLKARRL VESEIVPLAR
ELGLTLGQYA LKFVLSYPIT SVVVTATTVE ELEEYAEASD GKPLPRHHLE ALEEFWKRHR
GELAS