| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1643 |
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| Symbol | |
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| ID | 4909392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1531899 |
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| End bp | 1534499 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125390 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056526 |
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| Protein GI | 126460248 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGCCG CTGTAGCTCT CCTAATCTTG TACGTATACT TAGCGCTCCA CTCGCCCAAT
GTATTTAGCG TGCTGGTATA CGATGAGTCT AAGCTTACGC CTCCCGACGT AGAGCCAAAG
CTAGTAGACT CCATAGTCAA GCAGAAGAAC GGCAGCGGAG TGAACACCGT GCCGGTGGTC
ATATTCGGCC CCTTCCTTGA GGACAAGGCG AGGAATTTGA CAAAGCTGTT CCCTAATTCA
ACAACCCCGT GGACTATTTT AGATAAGGCA CTGGACATCT ACTGGCGACG CATAAAGGCC
ACCGTTGAAA ACGCCACTGT GGCGTTTAGA GACGTAGCCG TGGCCGTGGC AAACGCCACA
GGAGAGACGT GTAGCGAATT GAAGAAGCTC GTGCAGGGGT ACACAGAGGC GAGGGAGAGG
GCTAGGGAGC TCCTCTTAGC CACATACGGA GTCGCGGCGC TGGGGAAAGC TGTGGACAAC
AAGACGGAGG AGTTCCTCAA GAAGTACAGG GAGTATGTGG CAGTCTACGA CGTGGACGTG
GCGGTGAGAT TAGCAGCAGA GGAGGTCTAC GGCGTCAACG CGTCGCGGCT CTTGGCAAAT
GTCACGTGGA GGACGTGGGC CTCTGAGGGC GCCGTGGAGA ACGTGACAGA GGCCATTTTA
TCCACAGCCT TGAACAAAAC GTTGATACAA CTGGCGCGGG AAGTCGCAAC TGTAGGCGTG
GAGAAATACG TCTATGTATC CACAGTGAAT AAGGCCCCGC CTGTTTTGCG CCCCTACCTG
TCCTACCTCG TGTGTAACGG CGATGTGGAC CGCGCCGTCG AGCTCTTTAG AGCCGACTTG
CTGAGGAATA TAACGGCGCA GTATCCGCCC CCCACTTTGG ACACGCAGAA GCTCGCGTCC
CAGCTGGTGT ACAGGGGGAA GTACGCGCTT GCCTTTGTCA AAGCCACTGA AGATAAGCCG
GTTATACCCC TGGCGCTGGG CGTGCCTGTC TCTATGGCGT ACATAATGGA CAGCTTTAGA
GAAATTGTGA CACAAGACGT CTCCTCAATA GACAAAACCA CCGCAACGTC TCTGCTTGTG
GTACTTCTGG CGGTTATGGG GACGCTTGCG GCCCCCCTCG TAATAGTGTC CACCGTTGGC
CTCACGTACC TCGCCGTCTT GGGATTCCTA GAGCAGATAA GCAGCTTCCA AGGCATATAC
TACCTCGTCG TCTACATGGC GGCCCCCGTG GTCTTCGCCA TAGGAGTAGA CTACATGCTC
CTCATGACTA GCCGCTATGG GGAAGAGAGG GCTACTGGCA AAAGCAAGAG GGAGGCCATC
GACGTCGTGG TTAAATACGC CAGGAGGGCC ATAGCGGCTA GCGCCGCGGT GGTGGCCACA
TCGCTTGGCT CATTCGCCCT CTCCACTCTC CCATTTATGC AGTCCATAGG AATAGGCTAT
ATAATCACCA CGGCGTTTGT CGTAGCCTCC GTCTTCGTAG TTTTTCCCGC CATCTTGTAT
GTCCTGGGCG ATAAGATCTT CTGGCCTAGG AAAAAGGTCG TTGGACACAC AGGCAGGTCC
AGGCTGATGG CCAAGGCGGT GGACCTCGCG TTGAGAAGGC CCCTCGCCGT AGCCGCCGTA
GCGCTGGCCG CCACGCTAGT CTCCTTCATA TTTCTAACAA CGACTCTAAA GATCACAACC
GACCCAGTTG TGGCAATGCC AGAGACGCAG CACAAGAAGG CCCTAGAGAT TGCCACCAAA
TACTTTTCTA ACATCACGGC GATTTCTACC ACGTATGTAG TAATGAGGGA GCCTCCGCCG
CCGCAAGTTC TGGCAACCGT GGAGGGGCTA CCTCACTACG TTAACCATAC TGTGGAAAAG
ATCGGCGATT GGTATGTAAT CAATGTAAGG CTCTCTGTGG AAGACACATC TGACGAACTG
TTGAAGGTGT ATCAGCTCTT GAAGCCGCTT AAGGATCAAT ACGGCGCATT AATTGGCGGA
GCCGCCTCTT GGAAGAACGT GGTATTCAAC GAGATTTACG TCCGATTTTG GAACTTCCAA
GTGTACGTGG TAATAGTGGC GGTTTTCGTA ATACTCGCCG TGTTGTTGAA AAGCTTCCTA
ATCCCCCTCC GGCTGATAGC CACAGTGCTT ATGTCTATAG CGTGGAGCCT CGCGCTGGAG
GTGCTCCTCT TCCAAGAACT CGCAGGACAG CCCACATACT GGCTCGTGCC CATAATCCTC
TTCGCCTTTT TAATGGCCGT GGGGACAGAC TACGACATTT TCATTATTGC GAGGATAAGA
GAAGAGCTTG AGAAGGGGCT CGGCGAGAGG GAGGCGATAA AAAGGGCCAT CGTCACCACA
GGGCCCGTGA TAACGGGCGC CGCCTTGATC TTGGCCACGG CCTTCTCCAC CCTGCTCCTA
TCTCAGCTCA CTCTGCTGAG GCAGGTGGGC TTCACCATAG CCTTCGCGGC GCTGGTAGAC
GCCTTCGTCA TAAGGCCCCT CGTCGTGCCA GCCCTCATCG TGCTGGCGGG CAAGTACAAC
TGGCTGTGGG TCACGGGCTA CAGCGTCAAA GTTATAAACC CAGAGCTCGG CGGAGGCCGT
GGACCTAGTC CTCTTGATTA A
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| Protein sequence | MAAAVALLIL YVYLALHSPN VFSVLVYDES KLTPPDVEPK LVDSIVKQKN GSGVNTVPVV
IFGPFLEDKA RNLTKLFPNS TTPWTILDKA LDIYWRRIKA TVENATVAFR DVAVAVANAT
GETCSELKKL VQGYTEARER ARELLLATYG VAALGKAVDN KTEEFLKKYR EYVAVYDVDV
AVRLAAEEVY GVNASRLLAN VTWRTWASEG AVENVTEAIL STALNKTLIQ LAREVATVGV
EKYVYVSTVN KAPPVLRPYL SYLVCNGDVD RAVELFRADL LRNITAQYPP PTLDTQKLAS
QLVYRGKYAL AFVKATEDKP VIPLALGVPV SMAYIMDSFR EIVTQDVSSI DKTTATSLLV
VLLAVMGTLA APLVIVSTVG LTYLAVLGFL EQISSFQGIY YLVVYMAAPV VFAIGVDYML
LMTSRYGEER ATGKSKREAI DVVVKYARRA IAASAAVVAT SLGSFALSTL PFMQSIGIGY
IITTAFVVAS VFVVFPAILY VLGDKIFWPR KKVVGHTGRS RLMAKAVDLA LRRPLAVAAV
ALAATLVSFI FLTTTLKITT DPVVAMPETQ HKKALEIATK YFSNITAIST TYVVMREPPP
PQVLATVEGL PHYVNHTVEK IGDWYVINVR LSVEDTSDEL LKVYQLLKPL KDQYGALIGG
AASWKNVVFN EIYVRFWNFQ VYVVIVAVFV ILAVLLKSFL IPLRLIATVL MSIAWSLALE
VLLFQELAGQ PTYWLVPIIL FAFLMAVGTD YDIFIIARIR EELEKGLGER EAIKRAIVTT
GPVITGAALI LATAFSTLLL SQLTLLRQVG FTIAFAALVD AFVIRPLVVP ALIVLAGKYN
WLWVTGYSVK VINPELGGGR GPSPLD
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