Gene Pcal_1610 details

Gene Information

• Locus tag: Pcal_1610
• ID: 4909934
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1500898
• End bp: 1501569
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640125357
• Product: glutamine amidotransferase-like protein
• Protein accession: YP_001056493
• Protein GI: 126460215
• COG category: [R] General function prediction only
• COG ID: [COG0121] Predicted glutamine amidotransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTGTAGAT TTTTCGTCGC CATAGGCGGA TACCCGCCCG AGGAGGCTCT TGAGGATTTT 
GCGGCCGTCT CTAGGAGGGA TAGGACCATG GGCTGGAGCC ACGGCTCTGG GTGGGGCATG 
CTCTGGCTGA GGCGGGGCGA GGCCGGCGTC TATAGGTCTG TGAGAGCGAT TTGGGAGAGC 
TTTGTGCCCC CTCCCCGCGG CTACGACATA TACGTCTTAC ACTCGCGCCT AGCCTCCGTG 
GGCTCTATTG CAATAGAGAA TACCCACCCC ATCCTGCGCG GGGGCTTTGC CATTGTACAC 
AACGGCACAT TAGACAAGGA GGGACTCACG GCGGAGCTCA AGAGGCGGGG CCTAGACGTA 
AAGACCGCCG GGGGCACAGA CACAGAGCTT CTGCTGTCTG CGTTCGTTGA GCTAGGCGGC 
AACGAAAAGG CGGCTAGAGA GGTCGCCGAA GTGGCCAAGA GGTATATCGA CAGAGAGGAG 
CCGCTACTAA ACTTCGCCAT AGTAGACTTA AACGAGGCGC AGGTGTACCT ATACACCTAC 
AGGCTTGTGG AACATCCGCA CTTCGTACCT CAGATCTCCA AGGGGAGCCC CATTTTAATA 
AGCTCAGAGC CCGTGGGCAG AGACTCTTGG ATGCCTATAC CTAACGATAC GCTTCTCACA 
CTCCGCACAT AA 

 

Protein sequence

MCRFFVAIGG YPPEEALEDF AAVSRRDRTM GWSHGSGWGM LWLRRGEAGV YRSVRAIWES 
FVPPPRGYDI YVLHSRLASV GSIAIENTHP ILRGGFAIVH NGTLDKEGLT AELKRRGLDV 
KTAGGTDTEL LLSAFVELGG NEKAAREVAE VAKRYIDREE PLLNFAIVDL NEAQVYLYTY 
RLVEHPHFVP QISKGSPILI SSEPVGRDSW MPIPNDTLLT LRT