| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1607 |
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| Symbol | |
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| ID | 4909938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1495611 |
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| End bp | 1497329 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125354 |
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| Product | glutamate synthase (NADPH) GltB1 subunit / glutamate synthase (NADPH) GltB3 subunit |
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| Protein accession | YP_001056490 |
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| Protein GI | 126460212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0067] Glutamate synthase domain 1
[COG0070] Glutamate synthase domain 3 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGCA TCGTTGGAAT ATATAGCCTT GACGGAGGAT CAATAGACTT CTCAATAGTT
CTTCGTGGGC TTCTGGCAAT GAGAGAAAGA GGTACTCCTC ACGGGGCTGG CGTGGCTTAC
TACAGAGGTG ATGGAAGACT CCTCGTTAAA GCCTTCTCGC GCACGCCTGT TGGCAGATAT
GTCAAAATTA CAGACGGATT TTACGACGTA ACTTTGGAAA ATGAGACCTT AGACGACGGC
TTTGTATACT TAAAGAGTAG GTGGCTTGAC GTTTATAAAG TTGCCGATTG GCCGGAGGGC
TTGGCTGCTC GCTATAAGCT TGACGGCGTT AGAAGCCCGG TTTGGCTTGG CCACACGCGT
TACCCCACTA ATAGCCCTGG CAGGCTCCCG CTGTACTCCC ATCCCTTTGC CGTGGGGGAG
GTGGCCATTG TGCATAACGG TGATTTGTCC TCGTACGGCT CACATGTAGA ATTGATCAAC
CACTACGTAG GGGATGGCAA ATTCACTGGA AATGACAGCG AGTCTATTGC GCATCTCCTT
AACTATCTTT TACAGACGTA TGACGTAGAG GAGGCCATCA GAGAGCTGTT GTACGGACAG
CGCGTGAGGT GGGCTAGGCT AGACGGCCCG TACGCCGTGG CGTTTATGGT GGGCGGGCCG
AGTCCGTATT TTGGCGCTTT TGTCGATTTG TACCACTTTA GGCCCCTGTA CGTAGGGACC
GATGGGGCAA CGCTCTACGT GGCTAGTGAG GCCGCGGCTA TAAAGGCCAT GTCGCCGTCT
GCGCGGGTTT GGGCCCTTAG AGGTGGTGAG TACATCGTTG CGCATAAGGG CGAGGTCTGG
GGCAACTTCA AGATGCGCTA TGTTTATCCG CAGTCCCCGC TGCCTCCCGC AGAGGGGTTT
ATTGACGCGT CGGCCTTCGG CGTGACAGAG CTGGCGGATG TTATAAGGAG GGAGGTGGAA
AAGCGGGGAC AGGTAAGCGT CGTAAATGTG AACGGCCACA GATATCTCGC CAGTGGGCTC
GAAAGAGGGG TGGTTAAGAT GTGGGGTGTT GTGGGGAACG CCTCGGCGAA TGTGATGAGC
GGTGGGGAGG TCTACGTCTA TGGAGATGTG CAAGACGACT TTGGAGATGC CATGAACGGC
GGCGTGGCTG TAATATACGG CAACGCCGGC GACACCTTGG GACAGGCTAA GCGCGGCGGA
GAGATCTACG TCTACGGCGA CGTTGGCACA AGGGCCGCCA TTCAGCACCG CGGCGGCGTA
ATGATTATAG GCGGCTCCGC CGGGGATTTC CTGGGGGAGT ACATGGGGGG AGGCACCGTC
GTCGTACTAA GGGTTACTAA CGACGAGCCT GTGGGCAGGT ACATCGGAAG CGGGCTGGTG
GGAGGGAAGA TATACATACG CGGCGACGAC GTGCCCCCAG ACTTCGTGGG CTTAGCGCCG
TCCTCTAGGA GACTTAAGAG GTATGTGGAA TACCTATATA GGAGCGGGCG TATAGGCGAA
GAGGAGTATA GAAGGCTATC GTTGGGCGAC TTCGCGGCCG CGCCTTCCCA CCTTCATAAG
TTGTGGGGAG GAAGCCTCAG GGTAGAGCAT AGGCATTTAA CCGAAGAGGA GGTGAGGGAG
CTGGCACCGT ATGTGGCTAA GTTCAACGCA CTTTTTGGCC TCAACGTGGA CATCTCTAAG
GAGGTCTTCA CAGTGGTGAG CAGAGGCCAT GATTTCTAA
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| Protein sequence | MCGIVGIYSL DGGSIDFSIV LRGLLAMRER GTPHGAGVAY YRGDGRLLVK AFSRTPVGRY
VKITDGFYDV TLENETLDDG FVYLKSRWLD VYKVADWPEG LAARYKLDGV RSPVWLGHTR
YPTNSPGRLP LYSHPFAVGE VAIVHNGDLS SYGSHVELIN HYVGDGKFTG NDSESIAHLL
NYLLQTYDVE EAIRELLYGQ RVRWARLDGP YAVAFMVGGP SPYFGAFVDL YHFRPLYVGT
DGATLYVASE AAAIKAMSPS ARVWALRGGE YIVAHKGEVW GNFKMRYVYP QSPLPPAEGF
IDASAFGVTE LADVIRREVE KRGQVSVVNV NGHRYLASGL ERGVVKMWGV VGNASANVMS
GGEVYVYGDV QDDFGDAMNG GVAVIYGNAG DTLGQAKRGG EIYVYGDVGT RAAIQHRGGV
MIIGGSAGDF LGEYMGGGTV VVLRVTNDEP VGRYIGSGLV GGKIYIRGDD VPPDFVGLAP
SSRRLKRYVE YLYRSGRIGE EEYRRLSLGD FAAAPSHLHK LWGGSLRVEH RHLTEEEVRE
LAPYVAKFNA LFGLNVDISK EVFTVVSRGH DF
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