Gene Pcal_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1565 
Symbol 
ID4908282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1457404 
End bp1457751 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content53% 
IMG OID640125313 
Producthypothetical protein 
Protein accessionYP_001056449 
Protein GI126460171 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTGGG CCGTGCCCGC CGTCGTCCAA AAGATAGAGG GAGACACCGT GTGGGTTGAC 
ATAGGCGACG GGGTCCCTCG CCCCGCTGTT TTGGGGATAA GCGACGCTAG AGTTTCGCCA
GGAGACTTCG TCTTAGTACA TGCGGGGGTC GTCATCTCCG TCTTAGACTT CAACGCCATC
GAAGAGTTCA AAAAGAACTA CGTAGAACTC TTCACAGAGC TAGCCGCAGC CTCGGGGGAA
GATGTAGAAA AGGTGCGCGA AGAGGTGGAA AAAAGCTTCG AGGAGTGGCT AAAGACGGCT
AGGGAGAGAG CCTTGGAAAA ACAACAGAAC CAATACGCAG TTTGGTAA
 
Protein sequence
MCWAVPAVVQ KIEGDTVWVD IGDGVPRPAV LGISDARVSP GDFVLVHAGV VISVLDFNAI 
EEFKKNYVEL FTELAAASGE DVEKVREEVE KSFEEWLKTA RERALEKQQN QYAVW