| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1562 |
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| Symbol | |
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| ID | 4908629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1452998 |
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| End bp | 1454704 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640125310 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001056446 |
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| Protein GI | 126460168 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTC CACCTTCAAT GAAGTATAAG GCCGTCTCGA CGGCGGAGTA CTTGGCCTTT
TGGAAGACTA CCACTGGGGA TTTGTCCTCG CTAGTCCGCT TCTGGGAAAG CTGGGCCGAG
AAGCTTAAGT GGCACGAAAA GTGGAGAAGC CCATTTGACG GACGGAGGTG GTTCGCCGGG
GGGAAGCTCA ATGCCTCTGT AAACGTCTTG GACAAGCACA GGGGCACCTT TGTGTGGGAG
AAGGCCGGCC TAATTTTTGA GACAGAGGAG GGGGACGTCC ATGTCTACAC TTACTCACAG
CTCCACATGC TCACTGAGAA AGTCGCAGCG AAGTTGAGGG CGCTGAGGGT GGGGCCAGGG
GACTATGTGT TAATTTACGC GCCGCCGCTT CCAGAGACCT TGGCCGTCGC CTGGGCCGCC
GCCAGGGTGG GCGCCCCCTT CGAGTGGGTG TTCACTGGGT GGGGCTTCTG GTTCCTCTCG
CTTCGGATAA GAGCAGTGAG GCCCAAGGTG ATTATTACGA CGGACGCCTT TCCCAGGAGG
GGGAGGCCGG TGGCCGTCAA GGCGAATGTG GACAAGGCGG TTGAGGCCTC GGGCATAGAG
ACTAAAGTGG CGCTGATACC GAGGATGGGC ATTGACGTGG AGAAGAAGCC GTGGGACGTA
CACTTTTTCG ACGTGTCTGA CACAGGGGAG GGCGGCCCTG TTTTCGTAGA GGCCGACCAT
CCGCTTTTCG CGTTGCCTGC CACAGAGGCA GAGGGGTCGG AGGGCACCGT GGTGCACGAG
ACTGGGGGGT ATCTCACGCA GACCTACGCC ACGACTCTGT GGATTGGCCT TAGGCCACGG
GACACGTACT TCTGCACAGT GTTGCCGGGG TGGATAACGG GGATTACCTA CGTCCTCTTT
GGCCCATTCA TGGTGGGATC CACCGTGGTC GTATACGAGG GAGGCCCCGA CTACCCGCAC
TGGGATAGGT GGTGGTCTAT CCTTGAACGT TACGCTGTCA CGGTGTTTCT AACTACGCCT
GGCGCGTTGC GTCTGCTCTC TAGGTCGAGT AAGGTGGAGG AGTACAACTT GGACATGCTA
CGCTTGGTCT TGACAACTGC CGAGCCCATG GAGGAAGAGC TCTGGTGGTG GACGTATAAA
AATGCCACAG GCCAGTCCTT TGTCTACGAC TATGACCCCA AGAGCGGGGG CGGGAGAGTG
CCCGTGATCC ACTTCTACAT CACCAGAGAG GTGGGGACCT TCCTCGCAGG GAATTTGCCC
AACTTGGCCT TTGCTCCAAT AAAGCCGGGC ACAAGCGGAC TCCCCTTCCC AGGCTTTGCG
ATAGACTCCT TGGACAACGG CGCATCTGTG AGAAATAAGC CGGGGCGCCT TGTGCTCAAG
ATGCCTTGGC CAGGGATGCC GCTTGAGTCA CATAGGTGGG TCGGCGGAGT CTTCTACTTG
GGCGACATCG GCATAATAGA CGACGACATG TACATACGCG TTTTGGGCAG AGACGACGAA
GTCTTGAAGG TGAATGGGTA CAGGATTTCG CCAGGCGACA TAAGGAAGGC ACTTGAGGCC
GTTGGCATAA AGGCAGAGGT GTACGGGAGA TCAGACCCCC TGAAGTTTCA AGTGCCTGTG
GTAAAGGCTG GTAGCCCCCC TGAGGAAGTG AAGAAAGTCG TGAGGAGCTA CGTGGGCCCT
ATCGCAGACC CCGAGGTTGT TCAATAG
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| Protein sequence | MIVPPSMKYK AVSTAEYLAF WKTTTGDLSS LVRFWESWAE KLKWHEKWRS PFDGRRWFAG
GKLNASVNVL DKHRGTFVWE KAGLIFETEE GDVHVYTYSQ LHMLTEKVAA KLRALRVGPG
DYVLIYAPPL PETLAVAWAA ARVGAPFEWV FTGWGFWFLS LRIRAVRPKV IITTDAFPRR
GRPVAVKANV DKAVEASGIE TKVALIPRMG IDVEKKPWDV HFFDVSDTGE GGPVFVEADH
PLFALPATEA EGSEGTVVHE TGGYLTQTYA TTLWIGLRPR DTYFCTVLPG WITGITYVLF
GPFMVGSTVV VYEGGPDYPH WDRWWSILER YAVTVFLTTP GALRLLSRSS KVEEYNLDML
RLVLTTAEPM EEELWWWTYK NATGQSFVYD YDPKSGGGRV PVIHFYITRE VGTFLAGNLP
NLAFAPIKPG TSGLPFPGFA IDSLDNGASV RNKPGRLVLK MPWPGMPLES HRWVGGVFYL
GDIGIIDDDM YIRVLGRDDE VLKVNGYRIS PGDIRKALEA VGIKAEVYGR SDPLKFQVPV
VKAGSPPEEV KKVVRSYVGP IADPEVVQ
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