Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1528 |
Symbol | |
ID | 4908248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1427336 |
End bp | 1427971 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640125277 |
Product | cobalt-precorrin-6Y C(5)-methyltransferase |
Protein accession | YP_001056413 |
Protein GI | 126460135 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2241] Precorrin-6B methylase 1 |
TIGRFAM ID | [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00214205 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGTACA TAGTGGGCGT GGGGCCTGGA GACCCCTCTC TGGCCACGTT GAAAGCCGTA GATACAATCC GCGGGTGCAG AGTGGTGTTG GGCTGGCGTA GCGTGGTGGA GAGGTTTAAA CACCTGCTTG ATGGAAAGGA GGTGGTTTAT TTGACCTATG GGAATCAAGA GGCTGAGTTG AGGAGGGCGG CCGAGAGGGC CGCGGGCGAT GAGGTCTGCC TCTTGGTGCA TGGCGATCCC CTGGTCTCCG ACTGGGAGCT TCTTGAGAGG GTAAGGGCGC TTGGCGTAGA TTTCGAAGTG GTGAACGGCG TCTCCTCTGT AAACGTGGCG CTTGGAAGAG TGGGGCTGGA CTTGGCTCAG GTGGTGTTTC TCACCATGCA CGCCTCAAGG CCGCAGGACG TAGCCGAAGT GGCTTGTGTT GCAAGGAGCA GGGCGCTTGT AATTTTCCCT CCCCCTGGCG GAATTAGGCG GCTGGCAGAG GCGTTGATCT CGCTGGGCAT GGGCAAGTGC CGCGCCGTGG TGCTGGAAAA CCTTACTCTG CCGGGGGAGT GGGAGTGGAG GGGGTCTGTA GAAGAGATGG CAGAGCTCGA CGCAGGGGAC CTCGCGGCCG TCGTGGTGGA CTGCCGTGTC TCTTGA
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Protein sequence | MLYIVGVGPG DPSLATLKAV DTIRGCRVVL GWRSVVERFK HLLDGKEVVY LTYGNQEAEL RRAAERAAGD EVCLLVHGDP LVSDWELLER VRALGVDFEV VNGVSSVNVA LGRVGLDLAQ VVFLTMHASR PQDVAEVACV ARSRALVIFP PPGGIRRLAE ALISLGMGKC RAVVLENLTL PGEWEWRGSV EEMAELDAGD LAAVVVDCRV S
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