Gene Pcal_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1481 
SymbolhemA 
ID4910204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1378804 
End bp1379946 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content57% 
IMG OID640125230 
Productglutamyl-tRNA reductase 
Protein accessionYP_001056366 
Protein GI126460088 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTAG ACAAGTTGTA CGCCTTATCG CTTTCGCATA AGCGACTCAG TGTGGACGAG 
CTGTCCGAAA TTTCCAGAAA TGTGCACAAG ACCTGTTACA ACGTCCAAGC CTTTGTCTTT 
CACACGTGTA ACAGGGTTGA GGTGTACCTA TACGACGCCG ACGCTGGCCC AGCGGAACAC 
ATTAAGCGGT CTTACGGTCC CTACGTTGAA AAAGTGGCGG AGTTCAGAGG CGTTGAGGCG 
GCGAGGCATT TGTTTAGAGT GGCCGCCGGC CTTGAGTCCA TGCTCATAGG CGAGACAGAC 
GTCTTGGGCC AGCTGGAGGA GGCCTACGAG TCGCAAGTGA GGAGGGGGAA TCTCAGAGGT 
CTTCTCAAGA CCGTGGTAGA GAGGGCCGTG GCTGTGGGGA AGCGGGTGAG GACAGAGACG 
GGGATCTCTA GAGGGCCCAG AGGTCTCGGC TCTCTCTCAA TTGTGTATCT AAGCCGCCGT 
CTTCCACTGC GGGAGATCTC GGTATGCGTC ATAGGGGCTG GGGCAGTGGG CCGCGGAGTT 
GTTAAAGAGC TCATAGACGC AGGGGTGAGG CGGGTGGCTG TGGTTAATCG CACTGTGGAG 
AAGGCCGCCG ACCTGGGCGT AGAGGTGAGG CCTCTCACAA GCGAAAACGT GGAGTGGTGC 
CTCAGGGAGT TCGACGTAGT CTACACGGCC GTCTCCTCCT TCGAGCCCGT AGTCGTGTAC 
GTGCCCCCCG GCTCTAGGGT TAAGCTAGTG GTAGACTTGG GCGTGCCCCG CAACACTGCG 
CCGAATCTGC CAGTGGAGGT TGTTACGCTG GACCACTTGA GAGAGTTGGC TGAGGAGTTT 
AATAGGCAGA GGGCTGAGGA GGTGTCCAAG GCAGAGAAAA TTGTGGAAGA GGAAGTGGCG 
CGTCTCGAGG AAGTCCTTAG GAGGAGGTGG GTGGAGTTGG AGATGTCCGC CTTGCTGAAG 
AAGTGGTTTG CAGTGGCTGA GGAGGAGGGG GAGAGGGCCG GGGGAGGGCC GGCCAGGCTT 
GCCGCCATGT CGACTGTCAA GAGGACTCTC CTGCCCCTGG TGAACTACAT AAAAGAAGTT 
GCTGTGAAAG ACCTTGCGGT AGCCGAAGGC TTATTGCAAG TTCTCAAGTC TGCTTACGCA 
TGA
 
Protein sequence
MLVDKLYALS LSHKRLSVDE LSEISRNVHK TCYNVQAFVF HTCNRVEVYL YDADAGPAEH 
IKRSYGPYVE KVAEFRGVEA ARHLFRVAAG LESMLIGETD VLGQLEEAYE SQVRRGNLRG 
LLKTVVERAV AVGKRVRTET GISRGPRGLG SLSIVYLSRR LPLREISVCV IGAGAVGRGV 
VKELIDAGVR RVAVVNRTVE KAADLGVEVR PLTSENVEWC LREFDVVYTA VSSFEPVVVY 
VPPGSRVKLV VDLGVPRNTA PNLPVEVVTL DHLRELAEEF NRQRAEEVSK AEKIVEEEVA 
RLEEVLRRRW VELEMSALLK KWFAVAEEEG ERAGGGPARL AAMSTVKRTL LPLVNYIKEV 
AVKDLAVAEG LLQVLKSAYA