Gene Pcal_1463 details

Gene Information

• Locus tag: Pcal_1463
• ID: 4909973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1364798
• End bp: 1365340
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640125213
• Product: PaREP1 domain-containing protein
• Protein accession: YP_001056349
• Protein GI: 126460071

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTACACCG GCTCGCCCAG CCGAGACAAG CTTATAAGGC ACACCGCACT GCCGCACGTG 
GAAGAGCTCG CCAAGCCTTG GCTTAACCTT GAGGCGTACA GAGAGGCCAG AGTCAGGGAG 
GCCGTGTACG AGGCCGAGCT GGCTGAGGAG TTTCTCAAAA GTGGGCTAGT CAGAAACGCC 
GCTGGGAAGG CCTTCCAGGC GTGGAAGTCC CTCCTGGGCG CACTGCTGGT CGATAAGATT 
GAGGAGGTGG AGAAGGCGTA CCCCGGCGTT GTGAGAATCA GGGAGGGGAA GAGGATTAAG 
AAGGCCCTTT GGGTCATAGC GCTGGTGCCC ACTTCCCAGA TGAAAAAGCT CGCCCAACTC 
CTCGGCGGCG AGGAAAGCGC CTTGACATCT ATAGCGCTAG ACCTACACAG CTACCAGTAC 
AACGGCCCAG ACCCAGAGGG AATATACAGC CCATACCCAG ACGAGAAGAG CGCGCAGAGA 
GATGTAGAAA TCCTCGTCGG CAAAGTCAAA GAATATGTTG CAAAGCTTCC CCGTCGGAGC 
TAG 

 

Protein sequence

MYTGSPSRDK LIRHTALPHV EELAKPWLNL EAYREARVRE AVYEAELAEE FLKSGLVRNA 
AGKAFQAWKS LLGALLVDKI EEVEKAYPGV VRIREGKRIK KALWVIALVP TSQMKKLAQL 
LGGEESALTS IALDLHSYQY NGPDPEGIYS PYPDEKSAQR DVEILVGKVK EYVAKLPRRS