Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1447 |
Symbol | |
ID | 4909600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1353369 |
End bp | 1353842 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640125197 |
Product | hypothetical protein |
Protein accession | YP_001056333 |
Protein GI | 126460055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATA AACTCGACGA GAGGGAGTAC CTAATCTTGT CTTATGTCGC CATGCGCGAG CCCGTGACAG CTTATAGGAT AGCCGTCGAT AACCGCCTCT TCTTCTCCTA CACCTACAAG AAGGTGGTGG AACTCGAAAG GCGAGGCTTC TTGGCCTCAG CCGCGGCGTC TAGGGGGCAG AGGGTCTACA AAGCCACTCC CATGGGCATC ATAGCCCTCA TCCAGAGGGA GGGGCCCCGG CGGTACTTAG TGGATAAGCT GGCCTCGAAG TGGGGCCTAG ACGGGCCGCG CGCCCTCGCG CTTGTTGAGA AGGTGGCTAA GCTCTACAGG CCCGATATGC CGCTTAACGA CGTTGAGCTT TTGTACATAT ACCTGGTCAA ACGCGGGCTA ATAGACGGAG AGCTGGCGGC CGCCCTCTCG CCAGTGGCAG AGAGGGTAAA AGCCTCTCTG CGCGTCGTAT GTACATCTGT GTAA
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Protein sequence | MFDKLDEREY LILSYVAMRE PVTAYRIAVD NRLFFSYTYK KVVELERRGF LASAAASRGQ RVYKATPMGI IALIQREGPR RYLVDKLASK WGLDGPRALA LVEKVAKLYR PDMPLNDVEL LYIYLVKRGL IDGELAAALS PVAERVKASL RVVCTSV
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