Gene Pcal_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1447 
Symbol 
ID4909600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1353369 
End bp1353842 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content57% 
IMG OID640125197 
Producthypothetical protein 
Protein accessionYP_001056333 
Protein GI126460055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATA AACTCGACGA GAGGGAGTAC CTAATCTTGT CTTATGTCGC CATGCGCGAG 
CCCGTGACAG CTTATAGGAT AGCCGTCGAT AACCGCCTCT TCTTCTCCTA CACCTACAAG
AAGGTGGTGG AACTCGAAAG GCGAGGCTTC TTGGCCTCAG CCGCGGCGTC TAGGGGGCAG
AGGGTCTACA AAGCCACTCC CATGGGCATC ATAGCCCTCA TCCAGAGGGA GGGGCCCCGG
CGGTACTTAG TGGATAAGCT GGCCTCGAAG TGGGGCCTAG ACGGGCCGCG CGCCCTCGCG
CTTGTTGAGA AGGTGGCTAA GCTCTACAGG CCCGATATGC CGCTTAACGA CGTTGAGCTT
TTGTACATAT ACCTGGTCAA ACGCGGGCTA ATAGACGGAG AGCTGGCGGC CGCCCTCTCG
CCAGTGGCAG AGAGGGTAAA AGCCTCTCTG CGCGTCGTAT GTACATCTGT GTAA
 
Protein sequence
MFDKLDEREY LILSYVAMRE PVTAYRIAVD NRLFFSYTYK KVVELERRGF LASAAASRGQ 
RVYKATPMGI IALIQREGPR RYLVDKLASK WGLDGPRALA LVEKVAKLYR PDMPLNDVEL
LYIYLVKRGL IDGELAAALS PVAERVKASL RVVCTSV