Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1376 |
Symbol | |
ID | 4909298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1292235 |
End bp | 1292975 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640125127 |
Product | ABC transporter related |
Protein accession | YP_001056263 |
Protein GI | 126459985 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.585968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTCAAG TACCTGCTGT GCTCACGGTG AAGAACCTCT ACGTGTACAG AGGGGGCAAG GCGGTTCTTG AGGACGTGAC TTTCGACGTG GGGAAGGAGT TTGTGCTCGT GGTGGGTCCC AACGGCGCGG GGAAGACCAC CCTCTTCCTG GCAGTTTTAA ACCTGGTGAA GTACCGGGGC GAGATCTGTG TAGAGGGGGT ATGCGGCCCA GAGAGGGTGA AGAGGGTTGG CTACGTCCCG CAAGCGCTGG AGGTGGGGAG AGACGCAACT GTGTGGGAGT ACGTCTATCT GCCGGCCAAG TTCCGCGGCA TTCCGCCCGA GGTTGCTAAG GCGGCTTTGG AGGAGGTGGG GATGGCGGAC TTGGCGGATA GGCCGCTCTC CGCGCTGTCG GGGGGCCAGC GGCAGAGGGC CGCCATAGCA AGGGCCCTCG CGGCGGGCGG GGACATCTTG CTCTTGGACG AGCCCTTGGC CAATGTGGAT CCGCAGGGGA GGCTGGAGCT TCTCACACTG CTCAGAGAGC TGAAGAGGGG GAGGACGATT CTAATGGCCT CTCACGAGCT CACACTCCCC TCAGACTTGG CGGACAAGGT CTTGTTGCTC AACCGGAGAG TGGTGGCCTA CGGATCCCTT GACGAAGTTC TACAGGAGGA GGTCTTGTCC AAAGTGTATA GCTACGTCCG CGTGGCGAAG GTTGGGGGGA GCTACGTGTG TGTCACAGAG GACTATGCGC ATCCTCATTG A
|
Protein sequence | MVQVPAVLTV KNLYVYRGGK AVLEDVTFDV GKEFVLVVGP NGAGKTTLFL AVLNLVKYRG EICVEGVCGP ERVKRVGYVP QALEVGRDAT VWEYVYLPAK FRGIPPEVAK AALEEVGMAD LADRPLSALS GGQRQRAAIA RALAAGGDIL LLDEPLANVD PQGRLELLTL LRELKRGRTI LMASHELTLP SDLADKVLLL NRRVVAYGSL DEVLQEEVLS KVYSYVRVAK VGGSYVCVTE DYAHPH
|
| |