| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1367 |
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| Symbol | |
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| ID | 4909325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1281688 |
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| End bp | 1282824 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640125118 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_001056254 |
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| Protein GI | 126459976 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.508502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGT GTACTACGAG GTGCTGTGCA CAACATTTAA AAATGGAAAT TTGTAGGGTG
CTCATGCCGA TCGAAAAACG GTTCTCGGTC TACCTCGCAC TGGCGGCTCT GCTGGCGGTG
GCTGTGCATG GGGCAAAGAT CGTGGTGTCG TTCCCCGCGT ACAACGTGGT GCTCAAGGAG
GCGTTCCCGC AGGTGGAGGT AATCCTCTTG ACGAGGGGCG CCGCGGATCC GCACGAGTAT
CAACTCACGC CGCAAGACCT CGAGTTTCTC AAGTCGCTGG GGCCAAGCGA CGTCATTGTG
AGCTCGATGC ACGCGCCCTT TGAGCTAAAG ATCGCTGAGA TGGTGAAAAG GGGCGAGATC
AGGGCCAAGA TGATAGACAT CACGCAGCTG TACACCTTCT TAACCTTCGA CGGAAAAGAG
GTGCGCCTAG AGGAGGACCA CAACCATGAA CACGACCATC ACCATGGAGG CGAAGGGTAC
AGCCACGAGG AGCATGGCAG TGTGAACATG CACGAGCACG GGCTCTACCC GCCCAACGTC
GTAAGGCTCA TACGCGCAGT GTCTGAAGCC ACCGGCCTCA GCCCCGACCA GCGGTTTCTG
CAGAGGCTGG AGGAGTTGAA CAAGACTTAT GCGGGTAAGT TCACCGGGAT GGCTGTGGCA
ATTACGCCGG CCGCCCAGTA CATACTCTAC TGGCTCGGGT ATAGAGATAT AGTGGTCTTA
GTAAAAGAGG CGGGAGTGCC CCCGACCCCC CAGGACTTGG AAAAGGCTAT ACAGTACGTG
AAGGAGGGCG CACCTGCGTT AGCGGCGTAT GTGAGCGGAG AGAGGCCCAG AATCGTGGAC
CAATTCATTC AAAAAGTCGA GGAGGCCGGG GTGAGCAACC CGAAAATAGT GGCGGAAAGC
TTTGCCAACA GCTACATCGA CACTCTTGCC AGAGTCATAG AGAAAATAGC CGCACAGTTC
ACAGCGGCTA AGACCAGCGT GGCTACTGGC ACCACAACGC AACCCCACGC GCCGCAACAA
ACCGCCGCTC CCACGTCCGC AGGTCAGTGG GACAGTGCAT TGACGTGGAC GCTAGCGGCT
GTGGTAGCCG TAGTCATCGT CGGAGTGGGC ATTTGGGCGC TGAGGAGGCG CAGGTAG
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| Protein sequence | MTACTTRCCA QHLKMEICRV LMPIEKRFSV YLALAALLAV AVHGAKIVVS FPAYNVVLKE
AFPQVEVILL TRGAADPHEY QLTPQDLEFL KSLGPSDVIV SSMHAPFELK IAEMVKRGEI
RAKMIDITQL YTFLTFDGKE VRLEEDHNHE HDHHHGGEGY SHEEHGSVNM HEHGLYPPNV
VRLIRAVSEA TGLSPDQRFL QRLEELNKTY AGKFTGMAVA ITPAAQYILY WLGYRDIVVL
VKEAGVPPTP QDLEKAIQYV KEGAPALAAY VSGERPRIVD QFIQKVEEAG VSNPKIVAES
FANSYIDTLA RVIEKIAAQF TAAKTSVATG TTTQPHAPQQ TAAPTSAGQW DSALTWTLAA
VVAVVIVGVG IWALRRRR
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