| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1357 |
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| Symbol | |
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| ID | 4908309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1272334 |
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| End bp | 1273197 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125109 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001056245 |
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| Protein GI | 126459967 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.108341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGGC TCTACTTGGC GCTGTTGAAC GCGGCCGTTT GGCTATTCGC CGTTTTGTGG
ACTTTGCCCT TCGTGGGCTT ACTCATGCTC TCCCTGCTCC CGTACAGCGA AGTTGTGACA
AAGGGGTGGC TTAGGTTGCC GGAGCCGGGG AGTGTTACGT TGAAGAACTA CGTCGAGGCA
TTGTTTAACC CTCTTTATGA CCTCGCCGCG GGGTTTAGGA ACTCGCTTAT TGTTGCCTCT
GCGTCTACGG CCATTGCGCT GGGCGCGGCG GCGCTGTTGG CATACGCCTT TGTCAATCTG
CCGTTTCCTA TGAAGACTTT TATATTTACC TTGATAATCT TTGTAATGAT GGCCCCGCAG
CAGATCTCGG TGGTGCCCTT GTTCTTTCTC TATAACTGGC TGGATCAAAG CCTTGGGCCA
TACGGCGTCA AGTTCTACGA CTCTCTGCTG GGCATAATTC TGCTTCACAG CGCGTGGGGC
ACTGCCTGGG CCACCTTCTT CTTGCGCAAC TACTTCGCCC TTATCCCAAG GAGCCTTGTA
GAGGCGGCGA AGGTGGACGG GGCCAGGGAC TGGGCTATCT TCCGCAGGGT GGTGCTCCCA
TTGGCTAAGC CCGGCATCGT GGCCGCAGCT CTGCTACAGT ACACATGGGT TTGGAACGAC
CTCTTCTACG CCTTGGTCTT CCTCTCCTCG CCCTTTAACC AGGTGATTAC TCAGAAGGTG
GTGTTTCTCA AGGGCGAGTA CCACGTGGAT TGGGGCCTTC TCTCCGCGGG CTCTGTTGTC
ACAATGCTCA CGCCGCTTGT CTTATACGTG GTGTTTAACA AGTACTTTGT GAGAGGCGTC
GCCGGGTGGG GGGTGAAGCG ATGA
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| Protein sequence | MKRLYLALLN AAVWLFAVLW TLPFVGLLML SLLPYSEVVT KGWLRLPEPG SVTLKNYVEA
LFNPLYDLAA GFRNSLIVAS ASTAIALGAA ALLAYAFVNL PFPMKTFIFT LIIFVMMAPQ
QISVVPLFFL YNWLDQSLGP YGVKFYDSLL GIILLHSAWG TAWATFFLRN YFALIPRSLV
EAAKVDGARD WAIFRRVVLP LAKPGIVAAA LLQYTWVWND LFYALVFLSS PFNQVITQKV
VFLKGEYHVD WGLLSAGSVV TMLTPLVLYV VFNKYFVRGV AGWGVKR
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