| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1335 |
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| Symbol | |
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| ID | 4908468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1250692 |
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| End bp | 1251984 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640125086 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001056223 |
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| Protein GI | 126459945 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.654483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGAAC ACGTGGCTAG AGAGTGGCTT AGGCGCAGGC TGGGGACCTT CGGCCTATAC
GCCCTAGTCC ACTCAGACTT CCAATCCACC TACTACTTCC TTGTGGGCTA CATAGCCCTG
GCCGCGGGCG CCTTCGGCTT CATAGGCGCG GTGTACGGCG TATTGCTAAT GGCGGCGGTG
GCGCTGGCCT ACGGCGAGAT GGGGTCGCGG TTCCCAGAGG CGGGGGGGTC CTACCTCTAC
GTTAAGTACT CCTTCGGCGA AACGGTTGCC TTTCTCTCCA CCTGGATGCT GGCCTTTGAC
CAAATCGTCA TGGTGAGCTA CGGCACAATA GACGCGGCTA AGGTGTTAGA AAAGGCCCTG
GGGCTACACG TCGAGGTGCC TCTCGTCGCT GCTCTGCTCT CCACGGCGCT CTTCGCCATC
ACGCTGGTCG GGATTAGGGA GTCCGCCCTC TTCGCCACCG CCGTCGCAGT GCTAGACATC
TCCATCACCA CCACCATGGT AACGCTCTCC CTGGCCCAAA ACCCCGCGCC GCCCCCCTAC
TTCAACTGGC ACGGCGTAGA GACGGCGAAC CTCCTCCTCG CCTTCTCCCT CCTCTCTCGC
GGCTTCACCG GCCTCGACTC CATTGGCCAA CTCGCCGGCG AGGCGAGAGA GCCCCTTGTG
CAAGTCCCCC GCGCCACCCT GGCGGCTGTG GCCATGGGCA GCTTCTACGG CCTAGGCCTC
ATGGCCGCCA TAATGTCCAC CCTGACCCCT CAGCACATTG AGGACCCCGC GGTGGCCCCC
CTATACCTCG CCGCCAAGCT GAGCCCCGTC CTCTACGCCC TAGCCTCGGC CTCCATATTC
GCCGTAATGA TGACGGCGGC TCTCGCCGGC TACGTCTCCT TCTCCCGCCT CACCTACATA
ATGGCCCAGT CGGGGGACCT CCCACACCAC TTCGCCAAAG TGCACCCCCG CTTCAGAACC
CCCTACATCT CCCTCGTCGT CACCTACGCG GTGTCCCTAG CCCTAATAGC CGTGGGTGAG
GTGGGGATAA TACTGGCCAT ATATGCAATT GGGTCGCTGG TGAACTACCT CCTAGTCGCC
GCCGCCTTGG CCAAAGCCGC CAAGTCTGGC ACACTACACG GGGCCTTCAG AACGCCGTAC
ATAATGGGAG TCCCCCTCTC CTCCTGGATG GGACTAGCCC TCATACCCCC AGGCCTCGCC
CTAACCCTCG CAGAGAAGTG GCCGTACCTC TGGGCCCTGG CCCTGTGGGC CGCCGCCGGC
GCCGCCCTCT ACTACGCCAA GAAGAGGCGC TAG
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| Protein sequence | MGEHVAREWL RRRLGTFGLY ALVHSDFQST YYFLVGYIAL AAGAFGFIGA VYGVLLMAAV
ALAYGEMGSR FPEAGGSYLY VKYSFGETVA FLSTWMLAFD QIVMVSYGTI DAAKVLEKAL
GLHVEVPLVA ALLSTALFAI TLVGIRESAL FATAVAVLDI SITTTMVTLS LAQNPAPPPY
FNWHGVETAN LLLAFSLLSR GFTGLDSIGQ LAGEAREPLV QVPRATLAAV AMGSFYGLGL
MAAIMSTLTP QHIEDPAVAP LYLAAKLSPV LYALASASIF AVMMTAALAG YVSFSRLTYI
MAQSGDLPHH FAKVHPRFRT PYISLVVTYA VSLALIAVGE VGIILAIYAI GSLVNYLLVA
AALAKAAKSG TLHGAFRTPY IMGVPLSSWM GLALIPPGLA LTLAEKWPYL WALALWAAAG
AALYYAKKRR
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