| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1325 |
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| Symbol | |
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| ID | 4909880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1240982 |
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| End bp | 1242697 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640125076 |
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| Product | small GTP-binding protein |
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| Protein accession | YP_001056213 |
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| Protein GI | 126459935 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0370] Fe2+ transport system protein B |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.936216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTAAGC GCGTTGCCTT GGTGGGGCCC CCGAACGTTG GGAAGTCGAC GCTGTTCTAT
GCGTTGACTG GGCGCTATGT GAAAACGGCG AATTACCCGG GGAAGACTCT GGATTTGAAC
GTGGGGTATG TAAGAAGGTA CGGCATTGAG GTGGTGGATC TGCCCGGCGT CTTTGACCCG
TGGAACCCCA AGGACGAGGA TGAGAAGTTG GCCATTGAGG AGGCTCTCTC GGACAAATAC
GACGCGGTTG TTGTAGTTGG GGCGCCGCAT GCAATGAGGG AGGCGCTGGC TCTGGCCGAG
TTTTTGAGCC GCCGCAAGCC CGTGGTGTTT GTCTTCAACA TGGCAGACCT CGGGACGCCT
GGAGCGGAGC CGGAGGAGCT CTCGGCCAAG TGGGGGATCC CGGTTTTCTA CACCTCGGCG
GCGCGGAGGA GGGGGGTGGA GGAGTTGGCT AGGTTTTTGG CCTCTTGGAC GCCGGCGGGG
CCTACGCCGG TTAAGCTGGA GGAGGTGTCG GTTAAGCCCA CCGCGAGGCT GGCGGGGGCT
ATTTTCTCAA GGCCGTGGGC GGCTTTCACA CTGTTAATTG TGCTCTCCGC CGTAACGGTG
CTGGGGCTTT TAGCTGCGGT GGAGGGGATA CTGCCGTGGG GCGCCGAGGT GCCCGGCCTA
CTGCCCCTCG TAGAGCCGTA CCTAGACCTC GTGCCCGACT ATATCCGCGC GCTGGGCCTC
CCCGCCTGGC TGACCTCTCT GCTTGTCAAC GGGGCGTGGA CCGGCGTCTC TGCCTTTGTC
ACATTCATCC CCTACGTAGT GGCCGCTGTA GCCCTCGTGA CTTTTTATGA GGAGAGCGGC
GTCATAGGCG CCTTGGCTAG AACGTTGGAG ATGCGTTTCG CATCTCTGGG CATCCCCGGC
AGGGGACTTC TCTGCCTGGC AGTTGGCTCT ACGTGTAATG TTCCAGCAAT CTCCACGGTC
AAGGTGATGT GGGGGCGGGG CAACCGGGTT CTGACCGCCC TCCTTGTCCC ATATGTCCCC
TGCGCCGCGC GTCTTTCCCT CTTCGTCGCA GTGGCGGCAG CCGTGTTGGC AAATAGGCCC
TACCTAATAC CCCTCGCCGT TTTTCTCCCC TACGCGGCGT CCGGCGTTGC GATCTTGCTT
GCCTCTCTCA TCTACCGCAG AGCCCTCCGC GTGGAGCCAA GGGTGGAGGG CCTCCCGCCG
ACTCCCCTCA TGTGGCCAAG CGGCAGAATC TACGCGCTAA AGGTGTGGGC CTATCTCAAG
GACTTTTTAA CAAAGGCGGG GCCTCTGATA GTCTTACTCC CCCTAGCCCT CTGGCCCCTC
ACCGCGTTTG GCCCAGGGGG CTTTGCAGTG GACATGTCCC ACTCTTGGCT TGCCGTCTTT
GGGCAAGCCC TGGCCGCGGC GTTTGAGCCC ATGGGCATAC CTTGGCAGAT AACCACATCG
CTGGTTGCCG GGTACATATT CAAGGAGTTG GTGTGGGCCT TCATGGGGGC TCTGGGCGCC
GTGGATCTAC TGCCCGCTCT CTCGTTGCCC TCAGCCCTCG CTCTGCTGGT ATTCTTGGCT
TTCTACTCCG CCTGCATAGC CACCACCGCC ATGTTGATTA GACAAGTGGG CTTGCGTCTC
ACCGCCCTCT CCCTCGTGGT GCAGCTCCTC CTCGGCCTCG CCTTCGCCTA CGCCACCTAC
TTCACGGCCC TAGCCCTCCT AGAAACGTTT TTATAG
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| Protein sequence | MVKRVALVGP PNVGKSTLFY ALTGRYVKTA NYPGKTLDLN VGYVRRYGIE VVDLPGVFDP
WNPKDEDEKL AIEEALSDKY DAVVVVGAPH AMREALALAE FLSRRKPVVF VFNMADLGTP
GAEPEELSAK WGIPVFYTSA ARRRGVEELA RFLASWTPAG PTPVKLEEVS VKPTARLAGA
IFSRPWAAFT LLIVLSAVTV LGLLAAVEGI LPWGAEVPGL LPLVEPYLDL VPDYIRALGL
PAWLTSLLVN GAWTGVSAFV TFIPYVVAAV ALVTFYEESG VIGALARTLE MRFASLGIPG
RGLLCLAVGS TCNVPAISTV KVMWGRGNRV LTALLVPYVP CAARLSLFVA VAAAVLANRP
YLIPLAVFLP YAASGVAILL ASLIYRRALR VEPRVEGLPP TPLMWPSGRI YALKVWAYLK
DFLTKAGPLI VLLPLALWPL TAFGPGGFAV DMSHSWLAVF GQALAAAFEP MGIPWQITTS
LVAGYIFKEL VWAFMGALGA VDLLPALSLP SALALLVFLA FYSACIATTA MLIRQVGLRL
TALSLVVQLL LGLAFAYATY FTALALLETF L
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