Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1321 |
Symbol | |
ID | 4909002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1238024 |
End bp | 1238398 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640125073 |
Product | hypothetical protein |
Protein accession | YP_001056210 |
Protein GI | 126459932 |
COG category | [S] Function unknown |
COG ID | [COG2210] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGAGA GAGTTGGCAT AGTGCTCGCC TCAGACGACC CAGAGAGGCT CTACGTCGCG GCGACCTACG TGGCCACGGA GCTTGCCATG GGCAAAGAGG TGGTGATATT CGCCGCTGGG CGGTCTGTGC TGGCGCTGGC GGGCAGAGGC GGCGCCGGGG GGCCCTACTA CGAGAAGATG AGGGAGCTGA AGGTGGACTG GCACAGTCTC TTAAAGGCGT CTAAGCCCCT GGGGCTGAAG ATCGTGGCAT GTGAAACTGC GCTGAGGATA TACGAAGTGT CGCCAGACGA GCTGGACAAA GAGCTGGTGG ACGCGGTGTC CTCCATGTAC ACCTTCCTAG AGGAGGTGGG CAACGGCAGA GTAGTGGCCT TCTAG
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Protein sequence | MGERVGIVLA SDDPERLYVA ATYVATELAM GKEVVIFAAG RSVLALAGRG GAGGPYYEKM RELKVDWHSL LKASKPLGLK IVACETALRI YEVSPDELDK ELVDAVSSMY TFLEEVGNGR VVAF
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