Gene Pcal_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1321 
Symbol 
ID4909002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1238024 
End bp1238398 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID640125073 
Producthypothetical protein 
Protein accessionYP_001056210 
Protein GI126459932 
COG category[S] Function unknown 
COG ID[COG2210] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGA GAGTTGGCAT AGTGCTCGCC TCAGACGACC CAGAGAGGCT CTACGTCGCG 
GCGACCTACG TGGCCACGGA GCTTGCCATG GGCAAAGAGG TGGTGATATT CGCCGCTGGG
CGGTCTGTGC TGGCGCTGGC GGGCAGAGGC GGCGCCGGGG GGCCCTACTA CGAGAAGATG
AGGGAGCTGA AGGTGGACTG GCACAGTCTC TTAAAGGCGT CTAAGCCCCT GGGGCTGAAG
ATCGTGGCAT GTGAAACTGC GCTGAGGATA TACGAAGTGT CGCCAGACGA GCTGGACAAA
GAGCTGGTGG ACGCGGTGTC CTCCATGTAC ACCTTCCTAG AGGAGGTGGG CAACGGCAGA
GTAGTGGCCT TCTAG
 
Protein sequence
MGERVGIVLA SDDPERLYVA ATYVATELAM GKEVVIFAAG RSVLALAGRG GAGGPYYEKM 
RELKVDWHSL LKASKPLGLK IVACETALRI YEVSPDELDK ELVDAVSSMY TFLEEVGNGR
VVAF