| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1296 |
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| Symbol | |
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| ID | 4908924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1212439 |
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| End bp | 1214052 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640125049 |
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| Product | AAA ATPase |
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| Protein accession | YP_001056186 |
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| Protein GI | 126459908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0819436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGTAG CCGTGGTTGG GGAGTGTGGG TTTGTGTCTA GGCAGTTTCC CACGGTGGTG
TCGCTCGAGG AGGCGAAGGT GAGCGTCCTC TTGAGCTGCG ACGTGGGGGT GGGGGCCTTC
CTCGTGGCGG AGGACAAGGG GAGGAGGTGG CTGGGGAGAG TGGCCGAGGT AAAGATGGCC
GACCTCTACG CCGTGGCCAA CACCCCCGTG CTCTCCCCCG AGCAGGAGCT GGCGGTTGGC
CTCAGGCTGG GGCCAAAGAT CGCCGTGCTG GAGCTGGTGG CGGAGTGCGG CGGCTCCGCC
TGCGGCGCCC CGGCGACCCC CGTCCCAGTC CACGCCCCAG TGAGGAGGCC CAAGCCAGGC
GAGGTGGGGG AAATGCTCGG CCTCCCCCGC GACGGCGTCG AGCTGGGGGC CCTGGCACTC
CCCACGGGAG AGGAGGTGCC GGGGGAGGTT GTCAGACTGC CCCTAGACGC GTTGAGGCAC
CACCTCCTCG TGGTGGGGAC AACCGGCAGC GGGAAGACCG TCTTCGTGAA AGAGCTGGCG
CTCCAGCTGG CCCAGGCGGG GCACCGCGTC GTGGCGCTAG ACGCAGTGGG CCACTTCTAC
CACCTGGCCT ACAACGGCCT CACAGTGAAC GTTATACTGC CCACCACGGC CAGGCTCATG
AGGAGGGGCC CCCGGGCGGT GGTGAGGAGA GCTGTGGCAA AGGCGGCGTG GGGGAGGAGG
GCCAGGTACA AGGCCAGGCT GTACAAGAGA GGCGACGTCT TCACAAGGGC GGAGGTGGAA
GTGGAGTCCC CCGCCGGGAG GGCCAGGATG CGGGTCTACC CCTGGGCCCT AGAGAGCAGA
GACATACTCC GCCACCTCCC CAGGGCAGTG AGCATACTCT CCCAACAGGC CAAGATGTTC
TACAAGAGGG TCCTCCAAGA GGCTTGGAGG AAGGGGGCAC CAAGAGACGC GGCGGGCCTC
TTCCAATTTC TCACAAGCCC CACCGGCGAG GCGGGGAGGC GGCCGGCCAT AATGTACGAG
GCCATCGGCG CGTCCCTGGG ACTCCACGTC AGCACCATGG AAAACATAGT GAGGGCACTC
CTCTCAGTCA TAGAGACGGG GCTAGTGGAC GTGCGGGGAG AGGCCAGAGT CGTAGAGCCG
GACTACCGGG AGGCCCTCTC CGGCTACGCC GTGGTGGACA TCTCGGCCCT GGGCGTGGGC
CAGCAGAGGC TGGTGGTGTA CAGGGTGCTA GACGCAGTCT ACCAACTGGC GAGGCCCATA
ACCGCCGTTC TGGTAGACGA GGCGCACCTC TTCTTCCCCC AGACCAGGAG CGAAGACGAG
CAAGCCTTCC TAGAGGCCCT CTTGACCAAG CTCACCAGGC TCGGCAGGGC GAGAGGGGTG
GCTGTGGTCT TCGCCACCCA CACCCCCGAC GACTTAAACG ACGTAGTCCT CCAACTCGCC
AACACCAAGG CCGTGCTGAG AAGCGACACG AAGGTCCTAG AAAAGCTCTC CGTGCCCCCC
TCAGAGAGGA GGTTCATAGC CCTCGCAGAG AGGGGAGTGG CATACCTCTG GAGCTACGCC
TACAGAGTAC CCGTCTACGT CAAGGTAAAG AAGAGAGCCG CCCACTTCGG ATAA
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| Protein sequence | MRVAVVGECG FVSRQFPTVV SLEEAKVSVL LSCDVGVGAF LVAEDKGRRW LGRVAEVKMA
DLYAVANTPV LSPEQELAVG LRLGPKIAVL ELVAECGGSA CGAPATPVPV HAPVRRPKPG
EVGEMLGLPR DGVELGALAL PTGEEVPGEV VRLPLDALRH HLLVVGTTGS GKTVFVKELA
LQLAQAGHRV VALDAVGHFY HLAYNGLTVN VILPTTARLM RRGPRAVVRR AVAKAAWGRR
ARYKARLYKR GDVFTRAEVE VESPAGRARM RVYPWALESR DILRHLPRAV SILSQQAKMF
YKRVLQEAWR KGAPRDAAGL FQFLTSPTGE AGRRPAIMYE AIGASLGLHV STMENIVRAL
LSVIETGLVD VRGEARVVEP DYREALSGYA VVDISALGVG QQRLVVYRVL DAVYQLARPI
TAVLVDEAHL FFPQTRSEDE QAFLEALLTK LTRLGRARGV AVVFATHTPD DLNDVVLQLA
NTKAVLRSDT KVLEKLSVPP SERRFIALAE RGVAYLWSYA YRVPVYVKVK KRAAHFG
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