| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1281 |
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| Symbol | |
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| ID | 4909148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1192516 |
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| End bp | 1193322 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640125034 |
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| Product | CRISPR-associated protein APE2256 family |
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| Protein accession | YP_001056171 |
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| Protein GI | 126459893 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4006] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | [TIGR02619] putative CRISPR-associated protein, APE2256 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0224948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGTA CGGGTGGCAT GAAGCCGAGC TTCTTTGCAA TTACCGTGGG GACGTCTATC
TTGGCTAACG CGGCTAGGGA GGGGATTGTC CCCGAGGTTT GGTCAAGGCT GGCGCCGGAC
GACCCGAGGC AGGAGGAGGC GGAGCGGGGC CCCGTGGAGA GGCTGGTGGA GTTCGCCGTG
GCGGACCCCG AGAGGTGTTG CGCGGAGTTG AACACTGTGG CTAAGGTGGC GAAGAGGTGG
CCCGCCCTCT TTAGGCGGGT GAGGGCCGCC CTCTACGCCT CTGACACCGG GGCCGGCCGC
CTTGCGGCGC GGGCGCTGGA GGGGGCCTTC TGCAGGGCGC TGGCCAAGCT GGGCGTGTCG
ACGGAGGACT GCGCCGCCGA GGTGAAGGTG GTGCCGGGCC TGGGCCGGGA CTTCTCCAGG
TCACTGGGGG AGCTGGCCAG GGCCGTGGCG AGAGACGTCA AGTGCGCCAA GGCGAGGGGC
GTGAATCCGT ACGTCGTGGC CACGGGGGGC TACAAGCCGG AGTCCACCTT CGCCGTGGTG
GCGGCCTACC TCGCGGGGGC CCTCGACGTC TTCTACGTCC ACGAGAGCTT CCGCGACGTA
GTCAGCCTAG GCCTCCTCCC CATCGACCTA CACCCAACCG CGAGGCAGGT GGCGAGAGGC
GAGGGGGAGC CCGAGGACTT GGCCAAGGCG TGGGGCGTCG ACCCCCACCA CCTCGTGGAG
CTCGGCGTGC TGGCCGAGGA GGCCAGGCGG AGGACCCTCG CGCCCCACAT AGCCGCCCTC
ATCGACGCCC TAGAGACGCC CTGCTGA
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| Protein sequence | MGSTGGMKPS FFAITVGTSI LANAAREGIV PEVWSRLAPD DPRQEEAERG PVERLVEFAV
ADPERCCAEL NTVAKVAKRW PALFRRVRAA LYASDTGAGR LAARALEGAF CRALAKLGVS
TEDCAAEVKV VPGLGRDFSR SLGELARAVA RDVKCAKARG VNPYVVATGG YKPESTFAVV
AAYLAGALDV FYVHESFRDV VSLGLLPIDL HPTARQVARG EGEPEDLAKA WGVDPHHLVE
LGVLAEEARR RTLAPHIAAL IDALETPC
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