Gene Pcal_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1217 
Symbol 
ID4908859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1129454 
End bp1129750 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content57% 
IMG OID640124971 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001056108 
Protein GI126459830 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.207139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGTG AAAGAGAGAT TCTTGAGGAA GTTCGGCGGT GCCAATTCTG CGGGTTTTGT 
GAACACGTCT GTCCCACATA TGTGGCAACG CGGGAGAGGC ACTACGGCCC CAGGGGCAGG
ATCAACCTCA TCCTCATGGC GCTTACAAAC GGCGGAGTTG GAAAAGAGGC GCTCCGTGGA
GTGGCAACTT GTCTACACTG CAGGGCGTGC GACTTCCAGT GCCCCGCGGG GATACGGATC
GCCGAGGTGA TACGTAGCTT CAAGGCCTTG TACTACAGAC GAGTCGCCCA GAGGTAA
 
Protein sequence
MLSEREILEE VRRCQFCGFC EHVCPTYVAT RERHYGPRGR INLILMALTN GGVGKEALRG 
VATCLHCRAC DFQCPAGIRI AEVIRSFKAL YYRRVAQR