Gene Pcal_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1199 
Symbol 
ID4910049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1112815 
End bp1113474 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID640124953 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_001056090 
Protein GI126459812 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTTTTG TGGTTTTGGT GAAGATCTGC GGTGTTGCCA GGGTGGAGGA TGCGGAGGCG 
TTGGACGGCT TGGTAGAGTA CGTGGGGTTT ATCGTGGAGC CTACTAGTCC GCGGTCGGTG
CGGCGGGAGG CGCTTGGGGC GCTTAGGGGC GCCGTGTATA AGAGTACGCC TGTGCTCGTC
ACGGCGAGTC TGTCTCCCAG GGAGGCGGTG GACTTGGCGG CGGAGTTTGA GATCCCGGTG
GTGCAGCACC ACGGCGGCCT CACCGCGGCG GACGTCGACT ACGCGGCTTC GCGGGGGGTG
CGACTTGCCC CCGTGGCTGT GTACAGGCCG GGCGTCGACT TGGCCGAGGC GGTGGCCAGG
CTTTTGGCCC TGCCCCACGA GTACGTCCTC GTGGACGGGG AGAAGGGGGC TGCGCCGCGC
TACGAGGGTG GGCTCAAGGT ACTCCTCTCC GAGCTTAGGC GGGTTGTGCA CATGGGCAAA
GTGGCAGTGG CAGGCGGGGT TACCCCCGAG AACGCCCACC TCGTGGCGGG GCTTAGGCCC
TACATGGTGG ACGTGGCCAG CGGCGTAGAG TCTGCGCCTG GGGTAAAGGA GTTGGGGAAG
GTGGCGGCTC TCCTAAGGGC GCTGGGCAGG GGGGCAGGCG AATTCCCTAA GCGCCTTTAG
 
Protein sequence
MRFVVLVKIC GVARVEDAEA LDGLVEYVGF IVEPTSPRSV RREALGALRG AVYKSTPVLV 
TASLSPREAV DLAAEFEIPV VQHHGGLTAA DVDYAASRGV RLAPVAVYRP GVDLAEAVAR
LLALPHEYVL VDGEKGAAPR YEGGLKVLLS ELRRVVHMGK VAVAGGVTPE NAHLVAGLRP
YMVDVASGVE SAPGVKELGK VAALLRALGR GAGEFPKRL