Gene Pcal_1187 details

Gene Information

• Locus tag: Pcal_1187
• ID: 4910019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1102053
• End bp: 1102781
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640124941
• Product: hypothetical protein
• Protein accession: YP_001056078
• Protein GI: 126459800

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAGTCGC CGGAGTTGGA GGGCTTGAAA AAACTGCGCA CAGGCTTCCT AATCTTCATA 
GCGCTTGAGG TAGTGGCGGT GGCCTTGGTC TTTACAACAG TAGGCGCGGC CATCGGCGTA 
TTAGGCAGGG GAATAGACGC CCTCTCTGCC CTCATGGCGT TGCTGTGGGT CATAGTGGCG 
GCCGTGGTGG CCCTGGCCGT CGTGGGCCTC GTTGCCTTCC TCATATACAT CAGAGGCGGC 
TATGGAAAAC TGGCCCAGGT AGACCGCGGC TTTGGCATAT GCCGCACGGG CGTCACCATA 
TTAATCGCTG GCATCGTAGT GGCCCTGGCG GGGCTCCTCT CCATAGTTCC GTGGGCTGTG 
GAACTCGCGC GGACGGCGAT CTCACACCCC GGGCAGTGGA GAGGCTTGCC GCCCGACTTT 
CTGCTATCCC CTCTGCTCGC GGCGGTGGGC GTGGCGGTCG TCGGCGGAAT TTTGGCCCTA 
GTGGGCTGGA TACTGGTGTT CATCGTCGGC GCGTTTAAAC TGAGCGATAA GTACAAAGAG 
TCGCTGTTCC AAGCGGCGGG CATCCTCTAC ATCGTCGACA TCGTCCTGCT CTTCTTGGGA 
CTAGGCGGCC TCCTCACCCT GGTGGGCCAC ATACTAATGT ACATAGGCCT TGGGTCAGCC 
ATAAATAAGG CCGTGGCGTC TGCCCAGCCT CAAGCGCCCT CCTCGGCCAC GGAGAAGCCC 
ACGCTGTAG 

 

Protein sequence

MESPELEGLK KLRTGFLIFI ALEVVAVALV FTTVGAAIGV LGRGIDALSA LMALLWVIVA 
AVVALAVVGL VAFLIYIRGG YGKLAQVDRG FGICRTGVTI LIAGIVVALA GLLSIVPWAV 
ELARTAISHP GQWRGLPPDF LLSPLLAAVG VAVVGGILAL VGWILVFIVG AFKLSDKYKE 
SLFQAAGILY IVDIVLLFLG LGGLLTLVGH ILMYIGLGSA INKAVASAQP QAPSSATEKP 
TL