Gene Pcal_1165 details

Gene Information

• Locus tag: Pcal_1165
• ID: 4908616
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1087180
• End bp: 1087944
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640124919
• Product: hypothetical protein
• Protein accession: YP_001056056
• Protein GI: 126459778

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACTTTG TAACAGCCGC CCTAGCCGCA GTGGCCATAG CCGTGGCGCT ACTGGGAGTG 
GTGGTGTACA GGCTAATAAA GTCCCTAGAG GTGTACCTCA TACCCCTCTA CGCCGAAGTC 
ATAAGAAAGA GGGAGAGAGA CTACGTGTTA GTAGAATTCC TCACCTCCCT CCTAGTATCC 
AAAGGGCTTA TAACGGAGGT GGAGGCTGCG GCCCTGAAAA ATGTGTCAAT CCCAGGCCCC 
CTAACCGCCG AGGACTTAGA CAGAGTAGAC GAACTATTGG ACAAAGACCC ACGTCAGCTC 
ACCTACGAAG ACTTGATAGA CCTCAAAAAA GTGGCCTACA AGCTACTAGG CCGGCTAGAC 
AAGAGGTCGG TGAGACTAGG CCTAAGACTC CTCCGATACG CCTCCCGTGT CGAAGAAGCC 
ATAACCTCAA CCCTCAAAGC CGCCATCTTC CAAAACGCAG ACAAGGTAGA AGTCTCATAC 
GACGAGACCA CATGCACAGT ACACATGGCC AGCTACAGGA AAGGCGGCGA AGTAGACAGA 
TCCGAAGGCC CAGACCCAGA CTGTGTGGCA GAGACCGTCA AAACGCTGAA GGCCCTCGCC 
AGGAGAGAAG AGCCTCCAGA CAGCGAAAAA GCCAAAGCAG CGCTAGGCAG ATACGAGAAG 
TGTAAACAAA GCCAAGCCGC CGGCTGCAAA GCCATCAACG AAAACCTCTC CACCCTAGAA 
AAGAAGTCCC TCGACATCCT CCTAAGCCAA AAAAAGACAG GCTGA 

 

Protein sequence

MDFVTAALAA VAIAVALLGV VVYRLIKSLE VYLIPLYAEV IRKRERDYVL VEFLTSLLVS 
KGLITEVEAA ALKNVSIPGP LTAEDLDRVD ELLDKDPRQL TYEDLIDLKK VAYKLLGRLD 
KRSVRLGLRL LRYASRVEEA ITSTLKAAIF QNADKVEVSY DETTCTVHMA SYRKGGEVDR 
SEGPDPDCVA ETVKTLKALA RREEPPDSEK AKAALGRYEK CKQSQAAGCK AINENLSTLE 
KKSLDILLSQ KKTG