Gene Pcal_1158 details

Gene Information

• Locus tag: Pcal_1158
• ID: 4908260
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1081201
• End bp: 1081815
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640124912
• Product: hypothetical protein
• Protein accession: YP_001056049
• Protein GI: 126459771

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATCCACT GCCCGCTCTG GGGGCTGTTC CTCGCGGTGT TTATATCTCA CGCGGTGCCC 
CTGGCCCACC TGCCCGGCTA CACTCTTGTG GCCGTATGTG TTGCGACAAG CCACAATTTG 
GCCGATTTAG CGGCGGCCGC CTTGGCGGTG GCGCTGGGCG CTGCCCTGGG GAAAGTCGTG 
GTGTTTTTTA CAAGTCGTAA GATAGGCGAG GCTGTCATGG GCAGAGAGGC GGAGTACGCC 
AAGAGGTTGT TTGAGAAAAT TTCGAAGTGG GGAATAGACT TGGCGGTCGT GGCCTTTGCC 
GCATCTCCAC TGCCAGATGA CGTCTTGTAC ATACCGCTGG GCATGGCCGG ATACGACTTG 
AGGCGCTTCT TTGTTGCCGT GTTGGCTGGA AAGGCCGTCT TGGCCGTAAT CCTGGTGTTC 
TTCTTCGGAG AGCTGGGCAG CCTCTTTTTA GACACGCTGG GTGTCGCTGG GGTGGCGCTG 
ACCATTGGGC TGGCGGTCTT AGGCTCTGTG CTAGTGGCGA GGGTAAGGTG GTCCGCAGTG 
CTCCAGGCGT ACGAGGCCGA GGGGGCCAAG GCGGCTTTAA AGGCTGCGTT TAAGTCGGCG 
TTTTCAAGAA AATAA 

 

Protein sequence

MIHCPLWGLF LAVFISHAVP LAHLPGYTLV AVCVATSHNL ADLAAAALAV ALGAALGKVV 
VFFTSRKIGE AVMGREAEYA KRLFEKISKW GIDLAVVAFA ASPLPDDVLY IPLGMAGYDL 
RRFFVAVLAG KAVLAVILVF FFGELGSLFL DTLGVAGVAL TIGLAVLGSV LVARVRWSAV 
LQAYEAEGAK AALKAAFKSA FSRK