| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1114 |
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| Symbol | |
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| ID | 4909552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1046505 |
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| End bp | 1047413 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640124868 |
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| Product | diphthamide biosynthesis protein |
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| Protein accession | YP_001056005 |
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| Protein GI | 126459727 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1736] Diphthamide synthase subunit DPH2 |
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| TIGRFAM ID | [TIGR00322] diphthamide biosynthesis protein 2-related domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAACACG TAGAAGTGCA CCCAAAGGCG TGGGAGGCCG ACCGCGACAC CCTGATCGAG
GCGCCGCCCG GCTTTAAGTG GCTTGCGCTA AAGATCGCAG AGAAAACCGG CGCCGCCGTC
TCCGGAAGGC CCGTCTGGGG CAGTTGCGAC GTGAGAATTG ACCCACGCTA CAGGCGAATC
TTCCACCTCG GCCACGGCGT TCCGCCCAAC ATAGCGCACT TGCTTAAGAA GAACCTGGGC
GCGTCTCTGG AAAAAGTCGA GGAAGACGTC TACCGGCTAG CGGCCGGAGG CGTGGAGGTC
TACTTCCTCC CCGTCTACTA CAAGCCCCCG CCGCGCCTCC CCCGGCCAGA GGTCGAGGGA
AAGATATACT ACCCACTGCC CTACAGGAGA ATCGCCGAAG TAGTCCAGAG AGAGACGGGG
TTCCCAATGG CCAAGGAGCC CATCACGGGC TGCTGGGTAG GCGAGCCACC AGGCGAGGTG
GCCTACGTAG TTGCCACAGG CTCCTTCTAC CCCCTCACAG TCAAGCTCTT CTACCCGCAC
ACAAGGGTGT ACCAAATAGA CCCGTTCAGA GGCGAGGTCA AAGACGTCGA GAGCGAGTTT
GCACGGCTTA TGAAGCTGAA GGCCAGGGCC CACATCGCCG AGACGAAGAG AGTCGGCGTG
ATTTTGACCA CAAAGCCCGG CCAGAGGCAG GAGGAGAAGG CACGCGAGCT CGCAGAGAGG
GGCTTCCTCC TCATCGTCTT AGACGAGGTG ACCCCCGAGT ATATAGACGA CTTGCAGCTA
GATTTGGTAA TAAACACGGC GTGTCCCCGC ATTGGGCTAG ACGACCTAGA CCGCGTAAAA
ACCCCCATAC TTAACTACTA CGAGTACAAA GAGGGGCTCG ACCCCAGGGC CGCGGCGAGA
CTTCTTTAA
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| Protein sequence | MEHVEVHPKA WEADRDTLIE APPGFKWLAL KIAEKTGAAV SGRPVWGSCD VRIDPRYRRI
FHLGHGVPPN IAHLLKKNLG ASLEKVEEDV YRLAAGGVEV YFLPVYYKPP PRLPRPEVEG
KIYYPLPYRR IAEVVQRETG FPMAKEPITG CWVGEPPGEV AYVVATGSFY PLTVKLFYPH
TRVYQIDPFR GEVKDVESEF ARLMKLKARA HIAETKRVGV ILTTKPGQRQ EEKARELAER
GFLLIVLDEV TPEYIDDLQL DLVINTACPR IGLDDLDRVK TPILNYYEYK EGLDPRAAAR
LL
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