| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1109 |
|---|
| Symbol | |
|---|
| ID | 4910060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1042408 |
|---|
| End bp | 1042962 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640124863 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_001056000 |
|---|
| Protein GI | 126459722 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1102] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase
[TIGR02173] cytidylate kinase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGTTG TAGCAATATC TGGACAGCCG GGCAGCGGCA AGACCACTGT GGCGCGGGAG
GTGGCCCGGG TTTTAAAATT GCCCATGGTG TCTTCGGGGT CTATTTTTCG AGAGCTTGCG
GCGAAATACG GCATGGATCT GCTAGAGTTT CACAAATATG CCGAGCAGAA CACTGAGATA
GATAAAATAG TGGACTCCAT TGCCTTGGAG AAGGCCAAGG CCGGCAACGT GGTGCTAGAG
GGCCACTTAA CGGCGTGGAT TGTCAGACCC TACGCAGATG TGTGTATATA CCTCAAGGCG
TCTAAAGAGG TTAGGGCCAG GCGAGTGGCT ATGAGAGACG GCGTAAGCTT TGACGCCGCG
TTGAGGGAGA TAGAGGAGAG GGAGAGGCTG AACAAGAAGA GGTATTTGGC GATATACGAA
ATAGACATTG ATAACCTATC TATTTTTGAC TTAGTTTTAG ACACATCTTA CCTATCTATT
AATGATACTG TCAGGATAAG CCTAGACTTT ATATGTACTT CATTAAATTC AAAGTACATG
AAAAACTTCT GTTAA
|
|---|
| Protein sequence | MVVVAISGQP GSGKTTVARE VARVLKLPMV SSGSIFRELA AKYGMDLLEF HKYAEQNTEI
DKIVDSIALE KAKAGNVVLE GHLTAWIVRP YADVCIYLKA SKEVRARRVA MRDGVSFDAA
LREIEERERL NKKRYLAIYE IDIDNLSIFD LVLDTSYLSI NDTVRISLDF ICTSLNSKYM
KNFC
|
|---|
| |