Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1090 |
Symbol | |
ID | 4909987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1024140 |
End bp | 1024622 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640124842 |
Product | hypothetical protein |
Protein accession | YP_001055981 |
Protein GI | 126459703 |
COG category | [S] Function unknown |
COG ID | [COG1901] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCTTCC TGATAAAAAG CGACACTGTC TGCCCCTGGA CTATAGACGT CAAGGCCCTG GTAAAGGGGC GTTTCGACGT CTTGGTGGAC TTCGCCGCGG AGTCCATTCG GGGCGGGGCC CGGGAGGTCT ACATAGTGCT CTGCGACGGG ACCACATACC GCGTGTCGTC TGTGCCAGCC GGCCCCGCCG TAGAGGTCGC CTCTTGGCTT CTCTCACAGC CGAGCTTCAA GGCCTCTCTC GAGGCAATCC TCGCCAACTA CCGCCGCGTC TACTACCTCC ACGAGAGGGG GGTGGACATC TTGAACGCCG ACTTGTCTGG AGATGCCTTG TACGTCTTCG GCGACCACGA CGGCTTGTCT AGGGAGGACG AGGAAGTCCT TGCCAAGAGG GCGCAGTGGC TCTCCCTGGG CCCAGTGCCC TACATGTCTT GGCAGGCGGC GGCCTACGTG GCCTTCCTCT TGAGGAGACT TAATAAGCTG TAG
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Protein sequence | MSFLIKSDTV CPWTIDVKAL VKGRFDVLVD FAAESIRGGA REVYIVLCDG TTYRVSSVPA GPAVEVASWL LSQPSFKASL EAILANYRRV YYLHERGVDI LNADLSGDAL YVFGDHDGLS REDEEVLAKR AQWLSLGPVP YMSWQAAAYV AFLLRRLNKL
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