Gene Pcal_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1086 
Symbol 
ID4909549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1020087 
End bp1020497 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content48% 
IMG OID640124838 
Producthypothetical protein 
Protein accessionYP_001055977 
Protein GI126459699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAATTT ATGTTTCGCC GCATAAGTCA GACAACAAGC CGTCAGCTGC CACAGACTTA 
AAGCGAATTA TCATATCAGA GATTATTAAC GACGCCATCC ACGGCGTGAC CATACTAGAC
CAGCGAGGCG TGCCAGTGAT TCACCACCTC CCCAACACCC TCACCGCCAA GACACTTCGA
CAAGTGACAA ACCTCGTGGA AGTAATCAAC ATCATCAAGC AGAACCAAGA CGAGAGCCTA
GGCGAGTTTA ACTACGTCGT GGTAAAATAC GCAAACTACA AAGTCGGAAT ATTTGAAATA
CCCAACGGGA AGGGGTGGCT AATAGTCTTC GTAAACCCGC TATGGCACGT GGAAAACCTC
ATGCCTAAAA TCCGGCAATT TGCCCACAGA ATTTCTCAAG CCCTTTCCTG A
 
Protein sequence
MVIYVSPHKS DNKPSAATDL KRIIISEIIN DAIHGVTILD QRGVPVIHHL PNTLTAKTLR 
QVTNLVEVIN IIKQNQDESL GEFNYVVVKY ANYKVGIFEI PNGKGWLIVF VNPLWHVENL
MPKIRQFAHR ISQALS