Gene Pcal_1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1067 
Symbol 
ID4909994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp1005663 
End bp1006226 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content53% 
IMG OID640124819 
Producthypothetical protein 
Protein accessionYP_001055958 
Protein GI126459680 
COG category[S] Function unknown 
COG ID[COG2411] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.585968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAGGC ACCTCATGAT GTCTCGCAAA TATGTAAAAT TGCTCCTCAG TGGGAAGAAG 
AGGAGCACTA TTAGGCCTGG CGTGTTAAAA GTGGCGGAGA AGGTGTATAT ACACAGCGAG 
GGGCGCATTG TGGCAGTCGC CGAGGTGGAG GAGGTTGTAT ACAAGAGGGT TGGCGAGCTC 
ACCGACGAGG ATGCGCAGAT AGACGGCTTC AGCAGCAGAG ATGAGCTTGT GGCCTTTCTA 
AAGAGGCGCT ACCCAGGGCT GAAGGACAGC TCCGTCGTCA CAGTGATAAA ATTTAGCAAG 
GTAGAGGAAG TAGACATGCC CGAGGACGCC CACTATGGCG GATTAACGCC GGTTGAAATA 
GCGACGTTGG CGTTGAACAA GCTGGAGCTC AGCAGGCGGG AGAGAGAGAT CCTCAAGGCG 
GTGGTTGAGA CCAAGAGCTT GAGGAAGGCC GCCCTAAAGC TCTTTGGAAC AATAGAGAAA 
CGGGGGGTTA TCCGGAAAGT GCTAAGAAAA GCCGCGGCCA AGTTGATCAA TGGAGGCCTG 
GAGGAGAAAA ATAGAGACAA TTAG
 
Protein sequence
MIRHLMMSRK YVKLLLSGKK RSTIRPGVLK VAEKVYIHSE GRIVAVAEVE EVVYKRVGEL 
TDEDAQIDGF SSRDELVAFL KRRYPGLKDS SVVTVIKFSK VEEVDMPEDA HYGGLTPVEI 
ATLALNKLEL SRREREILKA VVETKSLRKA ALKLFGTIEK RGVIRKVLRK AAAKLINGGL 
EEKNRDN