| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1027 |
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| Symbol | |
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| ID | 4908515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 965029 |
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| End bp | 965757 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124779 |
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| Product | ABC transporter related |
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| Protein accession | YP_001055918 |
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| Protein GI | 126459640 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0179899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGCCG TAGTCGTAGA AAACCTAGTG GTCGCATACG GCGACCACGA GGTGGTGAAG
GGGGTCAGCC TCAACGTGCG AAAGGGGGAA AAGGTTGTAA TAATGGGCCC CTCTGGGTCT
GGCAAGTCCA CTTTCCTAAG ATCGCTGATT TGGCTCGTCA AGCCTAAGCA GGGCAGAATA
GTGATAGACG GCGTCGAAGT AGGTCCGGCC ACGTTGGCCA AGGTGAGGAC TAGGGTGGGC
TTCGTCTTCC AGAGCTACAA CCTATTCCCA CACCTACGCG TAATAGACAA CATCGTCCTC
CCGCTCGTCA AAGTGCACAA GCTACCGCTC AGCGAGGCGA GAGAGAGGGC AATGGAGGCG
CTACAACTAG TGGGACTGTT AGACAAGGCG AATGCATATC CGCTACAACT CTCAGGCGGC
CAGCAACAGA GGGTGGCAAT AGCCCGGGCA CTCGCCATTA GGCCCTCGGT TCTGATGTTA
GACGAGCCGA CCTCTGCCCT AGACCCAGAG CTGGTGGAGG AGGTGCTACA AGTGCTTGAG
GACATCGCCA GGCGCGGCAC CACGATGTTG ATAGTCACAC ACGAGGTAGA CTTCGCAGAA
GACGTAGCAG ATAGGGTGGT GTTCTTCGAA AACGGGAAAA TAGTGGAGGA GGGGCCGCCA
GAGATTTTGT ACAACCCCCG CACAGAGAGG CTCAGGCAGT TTTTAAGGAG GCTACACCGG
AGGATTTGA
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| Protein sequence | MSAVVVENLV VAYGDHEVVK GVSLNVRKGE KVVIMGPSGS GKSTFLRSLI WLVKPKQGRI
VIDGVEVGPA TLAKVRTRVG FVFQSYNLFP HLRVIDNIVL PLVKVHKLPL SEARERAMEA
LQLVGLLDKA NAYPLQLSGG QQQRVAIARA LAIRPSVLML DEPTSALDPE LVEEVLQVLE
DIARRGTTML IVTHEVDFAE DVADRVVFFE NGKIVEEGPP EILYNPRTER LRQFLRRLHR
RI
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