| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1016 |
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| Symbol | |
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| ID | 4908681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 956748 |
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| End bp | 957386 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124768 |
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| Product | phosphoserine phosphatase |
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| Protein accession | YP_001055907 |
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| Protein GI | 126459629 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.219478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAGCG CCCCTGCCTA TAAGGCGGTA ATATTAGACG TCGACGGCGT CGTGACCCCG
TTTACCTCTG CCTGGCAGAG GCTACACGCG GTATTTGGAG TGGACGCAGG GTTGAACAGG
AAGTTGTACA AACTCGGCCT AATCGACTAC TACGAGTGGG CACTCTTAGA CGTACTGCTC
TGGCGCGGCG CCCCGCGGAG GTTTGTAGAA GCCCGCTTCC AGACCACCCG CGGCTTAGAC
ACCTTATGTA ATACGTTGAA AGAAGCGGGC GTATATGCCG TAGCCATATC GGCCGGGGTC
GGCTACACAA GGGCTGTCTC GCACTGCTTC CACTTCTACG TGGTAAACGA CCTCATATAC
AAAGACGGAG AGGTGGCCAC AGTGGCTGTC TCTGTGAGCG ACAGAAACAA GGCGGAGATA
GCCGAGGCTA TATTGGATCT GCTTGGGCTT AGGTGGGAGG AGGCCGTGGC CGTGGGCGAC
GGCGAGGCTG ACTTGCCCAT GTTTAAGAAG GCCGGCTACT CCATCGCATT CAACCCAGTG
AACGAGGAAG TGGCCAGGGC CGCCAAGGCA GTGATTCGCG CCGAGACGCT CTACCCCCTT
GCTAAGTTTT TAAAGGCGCT CCTAGATACT GCCAGGTGA
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| Protein sequence | MPSAPAYKAV ILDVDGVVTP FTSAWQRLHA VFGVDAGLNR KLYKLGLIDY YEWALLDVLL
WRGAPRRFVE ARFQTTRGLD TLCNTLKEAG VYAVAISAGV GYTRAVSHCF HFYVVNDLIY
KDGEVATVAV SVSDRNKAEI AEAILDLLGL RWEEAVAVGD GEADLPMFKK AGYSIAFNPV
NEEVARAAKA VIRAETLYPL AKFLKALLDT AR
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