Gene Pcal_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0929 
Symbol 
ID4909236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp881513 
End bp882403 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content61% 
IMG OID640124677 
Productphosphoesterase domain-containing protein 
Protein accessionYP_001055820 
Protein GI126459542 
COG category[R] General function prediction only 
COG ID[COG0618] Exopolyphosphatase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAA CGCTGAGGGA GTTGCTGGCC GGGGCTAGGA GGGCCGCCGT TGTGACACAT 
AGGAGAGCTG ACGCAGACGC CTTGGCGTGC GCCGAGGTGC TAAAGCTGGT CTTGGAGAGG
CTGGGCGTGG AGGTAGTTGC CGTGGTTTGC CCAGAGGGAT CTCTCCTCGG CGGATGCTCC
GAGGATTTGC CCAGAGACGT GGACGTGTAT GTGCTCGCCG ACGTGGCCTC CCTAAGCCAA
GTGCCGCCCC TCCCCGGGAG AGCCATTAGA GTAGACCACC ACTACGCGGG AGACGACGTC
CCCGGCGTCG TTGTAAATAG GCCGAGTTGT ACCGAGGTTG CGCTGACCTT GGCGGAGGAA
GCCGGCGTAG AGATTCCGCC AGATGTGGCA AAGTTGGCCG TGCTCGGAAT TTATGCTGAC
ACAGGCGGGC TGAAGAGGGC TGACGCGGGG ACTCTCCGCG CCTTGTCTAA GCTCCTTGAA
AGACTCGGCG CACCTCTCGG CGACATTGTA AAAGAGGGGG GCGAGGCGTG GAACACGTCT
AAGACCATGG CGTTTTTAAA GGGGTTTCGA CGTCTTGAGG TCTACAGCTC GTCGGTTGGC
CTCATCTGCG CAACTCACGT GGGCGCCTAT GAGTCCGACG TGGCGTCGCT ACTCGTGTCA
GTGGGCTGTA GAGTGGCCGT GGTGGCATCC AGGAAGGAAG ACGGCGTCCA CGTCGTCTTT
AGGTCGAGGG ACTTCGACGT CGCCTCTATA GCGAGGCGGA TTGGGCAAGG CGGGGGACAC
AGAGAGGCCG CCGTGGCTGT GTTAAAGCGG AGAGTCTCCA AGTCTGAGCT CCCCTCAATC
CTAAGAGCTG TGGTTAAGGA GATAGCTCCA GACGCCAAGC TAGTCGAGTA G
 
Protein sequence
MLETLRELLA GARRAAVVTH RRADADALAC AEVLKLVLER LGVEVVAVVC PEGSLLGGCS 
EDLPRDVDVY VLADVASLSQ VPPLPGRAIR VDHHYAGDDV PGVVVNRPSC TEVALTLAEE
AGVEIPPDVA KLAVLGIYAD TGGLKRADAG TLRALSKLLE RLGAPLGDIV KEGGEAWNTS
KTMAFLKGFR RLEVYSSSVG LICATHVGAY ESDVASLLVS VGCRVAVVAS RKEDGVHVVF
RSRDFDVASI ARRIGQGGGH REAAVAVLKR RVSKSELPSI LRAVVKEIAP DAKLVE